RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PLGLB1Q02325 96 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 KRT72Q14CN4 511 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 IGFBP7Q16270 282 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 AP1ARQ63HQ0 302 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 TIGD3Q6B0B8 471 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 LRRC74BQ6ZQY2 392 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 PRICKLE2Q7Z3G6 844 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 CALHM3Q86XJ0 350 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 SIAH3Q8IW03 269 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 ZNF619Q8N2I2 560 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 ZNF614Q8N883 585 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 CPT1CQ8TCG5 803 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 FAR1Q8WVX9 515 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 NSL1Q96IY1 281 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 ZNF583Q96ND8 569 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 BARD1Q99728 777 aaKnown RBP14.48□□□□□ -0.09
COPS3-207ENST00000477299 TBL1XR1Q9BZK7 514 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 DSN1Q9H410 356 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 RAD21L1Q9H4I0 556 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 ZFP64Q9NPA5 681 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 A4GALTQ9NPC4 353 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 UBQLN4Q9NRR5 601 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 GID8Q9NWU2 228 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 LIPT1Q9Y234 373 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 WIF1Q9Y5W5 379 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 LIPGQ9Y5X9 500 aa14.48□□□□□ -0.09
COPS3-207ENST00000477299 ALG1L2C9J202 215 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 NPIPA5E9PKD4 350 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 SNPHO15079 494 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 KIAA0513O60268 411 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 UBOX5O94941 541 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 SOX30O94993 753 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 WISP1O95388 367 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 AK1P00568 194 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 NPPAP01160 153 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 TCEA1P23193 301 aaKnown RBP14.47□□□□□ -0.09
COPS3-207ENST00000477299 MASP1P48740 699 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 SLC7A2P52569 658 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 PSME3P61289 254 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 RPP38P78345 283 aaKnown RBP14.47□□□□□ -0.09
COPS3-207ENST00000477299 CDK6Q00534 326 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 ALDH6A1Q02252 535 aaKnown RBP14.47□□□□□ -0.09
COPS3-207ENST00000477299 SNTA1Q13424 505 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 ART3Q13508 389 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 ZNF141Q15928 474 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 CYP51A1Q16850 503 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 CMPK2Q5EBM0 449 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 CBLN3Q6UW01 205 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 RINLQ6ZS11 566 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 TRPM8Q7Z2W7 1104 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 PACS2Q86VP3 889 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 VRK2Q86Y07 508 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 OR1J4Q8NGS1 313 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 SH3YL1Q96HL8 342 aaPredicted RBP14.47□□□□□ -0.09
COPS3-207ENST00000477299 TMEM41AQ96HV5 264 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 TREX2Q9BQ50 279 aaPredicted RBP14.47□□□□□ -0.09
COPS3-207ENST00000477299 P2RX2Q9UBL9 471 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 NPIPA1Q9UND3 350 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 ABCG2Q9UNQ0 655 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 CHST2Q9Y4C5 530 aa14.47□□□□□ -0.09
COPS3-207ENST00000477299 EIF4E1BA6NMX2 242 aaKnown RBP14.46□□□□□ -0.09
COPS3-207ENST00000477299 SCDO00767 359 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 NDUFB5O43674 189 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 SNX4O95219 450 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 NGFRP08138 427 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 ESRRAP11474 423 aaPredicted RBP14.46□□□□□ -0.09
COPS3-207ENST00000477299 ZNF24P17028 368 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 AQP1P29972 269 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 MAGEA8P43361 318 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 ANXA11P50995 505 aaKnown RBP14.46□□□□□ -0.09
COPS3-207ENST00000477299 TDGF1P3P51864 188 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 TLE1Q04724 770 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 SCARB2Q14108 478 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 TBCELQ5QJ74 424 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 FAM180AQ6UWF9 173 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 HACD2Q6Y1H2 254 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 NET1Q7Z628 596 aaPredicted RBP14.46□□□□□ -0.09
COPS3-207ENST00000477299 IFNEQ86WN2 208 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 FAM98AQ8NCA5 519 aaKnown RBP14.46□□□□□ -0.09
COPS3-207ENST00000477299 OR2M3Q8NG83 312 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 OR8J3Q8NGG0 315 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 PHOSPHO1Q8TCT1 267 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 ZNF597Q96LX8 424 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 NPAS1Q99742 590 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 ECSITQ9BQ95 431 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 UBQLN3Q9H347 655 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 TMEM38AQ9H6F2 299 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 MTHFD2LQ9H903 347 aaPredicted RBP14.46□□□□□ -0.09
COPS3-207ENST00000477299 RYDENQ9NUL5 291 aaKnown RBP14.46□□□□□ -0.09
COPS3-207ENST00000477299 PPP4R1LQ9P1A2 415 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 TNFRSF10DQ9UBN6 386 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 CARD8Q9Y2G2 431 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 DTNAQ9Y4J8 743 aa14.46□□□□□ -0.09
COPS3-207ENST00000477299 DSPPQ9NZW4 1301 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 SERINC4A6NH21 518 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 AGAP5A6NIR3 686 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 B2RBV5 119 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 ADAM11O75078 769 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 PGM3O95394 542 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 RPS4Y1P22090 263 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms