RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SERHLQ9NQF3 203 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PAQR5Q9NXK6 330 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 GALNT8Q9NY28 637 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 MAT2BQ9NZL9 334 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PPP4R1LQ9P1A2 415 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 TRPS1Q9UHF7 1281 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PCTPQ9UKL6 214 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 UTS2RQ9UKP6 389 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 TACC2O95359 2948 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 MPDZO75970 2070 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 ABCA4P78363 2273 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PRRC2AP48634 2157 aaKnown RBP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 GNG14A0A1W2PPG7 69 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 SLC22A20A6NK97 555 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 A8MXE2 369 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PLOD2O00469 737 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 OR7A17O14581 309 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 SIX3O95343 332 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 HRGP04196 525 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 CT62P0C5K7 136 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 POU2F1P14859 743 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 DDX5P17844 614 aaKnown RBP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 DPP4P27487 766 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 LSP1P33241 339 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 CD79BP40259 229 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 AGFG1P52594 562 aaKnown RBP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PHC1P78364 1004 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PPP2R2BQ00005 443 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 HMGCS1Q01581 520 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 C2orf54Q08AI8 447 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 GLYR1Q49A26 553 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PDSS1Q5T2R2 415 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 FNDC7Q5VTL7 733 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 LARP4Q71RC2 724 aaKnown RBP eCLIP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 FAM9CQ8IZT9 166 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 CNEP1R1Q8N9A8 125 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 OR4F6Q8NGB9 312 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 RDH11Q8TC12 318 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 CAVIN3Q969G5 261 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 FOXRED1Q96CU9 486 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 BBS4Q96RK4 519 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 NODALQ96S42 347 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PIGQQ9BRB3 760 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 MED18Q9BUE0 208 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PRRG4Q9BZD6 226 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 DLL4Q9NR61 685 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF639Q9UID6 485 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 ABCG2Q9UNQ0 655 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 RPH3AQ9Y2J0 694 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 WBP11Q9Y2W2 641 aaKnown RBP6.57□□□□□ -1.36
BRCA1-214ENST00000477152 PLLPQ9Y342 182 aa6.57□□□□□ -1.36
BRCA1-214ENST00000477152 UGT2B11O75310 529 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 PDYNP01213 254 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 HEXAP06865 529 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF708P17019 499 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 CD53P19397 219 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 S1PR1P21453 382 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 MC3RP41968 323 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 GUCY2DQ02846 1103 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 ACSM2AQ08AH3 577 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 EXOSC7Q15024 291 aaKnown RBP6.56□□□□□ -1.36
BRCA1-214ENST00000477152 NNATQ16517 81 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 SGCBQ16585 318 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 DECR1Q16698 335 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 ACSM2BQ68CK6 577 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 FAM111BQ6SJ93 734 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 STK32CQ86UX6 486 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 SLC22A9Q8IVM8 553 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 MMGT1Q8N4V1 131 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 C1orf162Q8NEQ5 155 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-214ENST00000477152 OR52B6Q8NGF0 335 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 TMBIM1Q969X1 311 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 TM4SF18Q96CE8 201 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 CTHRC1Q96CG8 243 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 MTBPQ96DY7 904 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 CCDC126Q96EE4 140 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 PGM2Q96G03 612 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF845Q96IR2 970 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-214ENST00000477152 BTBD9Q96Q07 612 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 ADOQ96SZ5 270 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 CCL19Q99731 98 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 EHD3Q9NZN3 535 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 CLCF1Q9UBD9 225 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 XPR1Q9UBH6 696 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 CES1P1Q9UKY3 287 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 GRID1Q9ULK0 1009 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 PROCRQ9UNN8 238 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF175Q9Y473 711 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 TESMINQ9Y4I5 508 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 ANKHD1Q8IWZ3 2542 aaKnown RBP6.56□□□□□ -1.36
BRCA1-214ENST00000477152 SPG11Q96JI7 2443 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 ITPR3Q14573 2671 aa6.56□□□□□ -1.36
BRCA1-214ENST00000477152 ADGRG4Q8IZF6 3080 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 A0A1W2PNV4 684 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 WASHC1A8K0Z3 465 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 C16orf97H3BN30 126 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 EMC8O43402 210 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 HCRTR2O43614 444 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 PCDH7O60245 1069 aa6.55□□□□□ -1.36
BRCA1-214ENST00000477152 APOL3O95236 402 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms