RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 NPIPA1Q9UND3 350 aa13.16□□□□□ -0.3
CCNL1-217ENST00000476367 ZNF407Q9C0G0 2248 aa13.16□□□□□ -0.3
CCNL1-217ENST00000476367 LRRC3CA6NJW4 275 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 WISP2O76076 250 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 TDGF1P3P51864 188 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 PPIAP62937 165 aaKnown RBP13.15□□□□□ -0.3
CCNL1-217ENST00000476367 CHRNEQ04844 493 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 FOXO1Q12778 655 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 ART3Q13508 389 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 GRAMD1BQ3KR37 738 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 RPS26P11Q5JNZ5 115 aaPredicted RBP13.15□□□□□ -0.3
CCNL1-217ENST00000476367 ZNF324BQ6AW86 544 aaPredicted RBP13.15□□□□□ -0.3
CCNL1-217ENST00000476367 HMGN2P46Q86SG4 172 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 ATCAYQ86WG3 371 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 PGAM4Q8N0Y7 254 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 TMEM19Q96HH6 336 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 TRNT1Q96Q11 434 aaKnown RBP13.15□□□□□ -0.3
CCNL1-217ENST00000476367 ANGPTL4Q9BY76 406 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 CD300AQ9UGN4 299 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 CHST2Q9Y4C5 530 aa13.15□□□□□ -0.3
CCNL1-217ENST00000476367 ANKRD33BA6NCL7 494 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 PRORSD1PA6NEY8 169 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 EVPLLA8MZ36 301 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 J3QKU1 62 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 GNB5O14775 395 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 KIAA0513O60268 411 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 BCAS1O75363 584 aaPredicted RBP13.14□□□□□ -0.31
CCNL1-217ENST00000476367 UGT2B17O75795 530 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 SOX30O94993 753 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 UTS2O95399 124 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 OXSR1O95747 527 aaPredicted RBP13.14□□□□□ -0.31
CCNL1-217ENST00000476367 BCHEP06276 602 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 GUSBP08236 651 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 RPS4Y1P22090 263 aaKnown RBP13.14□□□□□ -0.31
CCNL1-217ENST00000476367 EVI2BP34910 448 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 MAGEA5P43359 124 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 UQCRFS1P47985 274 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 TXNL4AP83876 142 aaKnown RBP13.14□□□□□ -0.31
CCNL1-217ENST00000476367 MRPL49Q13405 166 aaKnown RBP13.14□□□□□ -0.31
CCNL1-217ENST00000476367 TMEM81Q6P7N7 255 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 PACS2Q86VP3 889 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 SLC22A16Q86VW1 577 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 SIAH3Q8IW03 269 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 DEFB107AQ8IZN7 70 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 TREX2Q9BQ50 279 aaPredicted RBP13.14□□□□□ -0.31
CCNL1-217ENST00000476367 DNAJC13O75165 2243 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 ESPL1Q14674 2120 aa13.14□□□□□ -0.31
CCNL1-217ENST00000476367 TMEM229AB2RXF0 380 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 CDC40O60508 579 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCNL1-217ENST00000476367 TRIM3O75382 744 aaPredicted RBP13.13□□□□□ -0.31
CCNL1-217ENST00000476367 STX11O75558 287 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 SNX4O95219 450 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 AGR2O95994 175 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 RFPL3SP0C7P2 107 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 EDN3P14138 238 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ATP6V1C1P21283 382 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 PCBP3P57721 371 aaKnown RBP13.13□□□□□ -0.31
CCNL1-217ENST00000476367 HSF1Q00613 529 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 KLHL26Q53HC5 615 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 GCNT6Q5T4J0 391 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 SLC30A6Q6NXT4 461 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 LRRC74BQ6ZQY2 392 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 C16orf62Q7Z3J2 963 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 COMTD1Q86VU5 262 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 TMEM251Q8N6I4 163 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 NFKBIDQ8NI38 313 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 DEFB127Q9H1M4 99 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 C1orf21Q9H246 121 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 RAD21L1Q9H4I0 556 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ZNF703Q9H7S9 590 aaPredicted RBP13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ZFP64Q9NPA5 681 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 EXD2Q9NVH0 621 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 P2RX2Q9UBL9 471 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 SEC14L3Q9UDX4 400 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 CORO2BQ9UQ03 480 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 LIPT1Q9Y234 373 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 PCDHGB3Q9Y5G1 929 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 WIF1Q9Y5W5 379 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ANKUB1A6NFN9 424 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 CLDN24A6NM45 220 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 GLSO94925 669 aaPredicted RBP13.13□□□□□ -0.31
CCNL1-217ENST00000476367 PGM3O95394 542 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 AK1P00568 194 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 NGFRP08138 427 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 CELA3AP09093 270 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 TBXA2RP21731 343 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 GNLYP22749 145 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 GDF1P27539 372 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 GSK3BP49841 420 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 RNF144AP50876 292 aaPredicted RBP13.13□□□□□ -0.31
CCNL1-217ENST00000476367 CDK6Q00534 326 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 LIPEQ05469 1076 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 CEACAM7Q14002 265 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ELOAQ14241 798 aaKnown RBP13.13□□□□□ -0.31
CCNL1-217ENST00000476367 CD226Q15762 336 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ZNF141Q15928 474 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 FXNQ16595 210 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 CMPK2Q5EBM0 449 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 ATAD3BQ5T9A4 648 aa13.13□□□□□ -0.31
CCNL1-217ENST00000476367 GFRALQ6UXV0 394 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms