RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 EFNA3P52797 238 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 RAD23AP54725 363 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 SLC26A5P58743 744 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 RNF4P78317 190 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 GABREP78334 506 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 PLCXD2Q0VAA5 305 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 DAG1Q14118 895 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 NRF1Q16656 503 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 RFX4Q33E94 735 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 COLEC12Q5KU26 742 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 OTUD3Q5T2D3 398 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 WLSQ5T9L3 541 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 OLIG3Q7RTU3 272 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 KBTBD2Q8IY47 623 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 LINC00471Q8N535 108 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF321PQ8N8H1 164 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 NFAM1Q8NET5 270 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 NUBPLQ8TB37 319 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 MAGEE2Q8TD90 523 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 NXPE2Q96DL1 559 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 CRELD1Q96HD1 420 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 RDH12Q96NR8 316 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 ARHGDIGQ99819 225 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 OSBPL11Q9BXB4 747 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 DEFB126Q9BYW3 111 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 AMBRA1Q9C0C7 1298 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF700Q9H0M5 742 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 QRSL1Q9H0R6 528 aaKnown RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 NXF5Q9H1B4 397 aaKnown RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 AKIRIN1Q9H9L7 192 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF556Q9HAH1 456 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 NTN4Q9HB63 628 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 UBQLN4Q9NRR5 601 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 KCND3Q9UK17 655 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 RAB26Q9ULW5 256 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 DTX4Q9Y2E6 619 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 U3KQV3 271 aa11.3□□□□□ -0.6
MRPL55-227ENST00000475832 NSG1A0A0A6YYJ2 146 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 TEX51A0A1B0GUA7 166 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 TMEM229AB2RXF0 380 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 M0R3H8 397 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 PDLIM1O00151 329 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 SOCS2O14508 198 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 EI24O14681 340 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 ABCB7O75027 752 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 KLF7O75840 302 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 DXOO77932 396 aaKnown RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 DIRAS1O95057 198 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 H1F0P07305 194 aaKnown RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 UQCRBP14927 111 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF26P17031 533 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 RPS4Y1P22090 263 aaKnown RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 YAP1P46937 504 aaKnown RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 TMED10P49755 219 aaKnown RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 AQP4P55087 323 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 CDH12P55289 794 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 TAS2R41P59536 307 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 EEF1A1P68104 462 aaKnown RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 DNASE1L3Q13609 305 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 EFR3AQ14156 821 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 SSPNQ14714 243 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF141Q15928 474 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 BTBD16Q32M84 506 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 IGF2-ASQ6U949 168 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF836Q6ZNA1 936 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 NDUFAF7Q7L592 441 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF550Q7Z398 422 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 RAB43Q86YS6 212 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 C9orf40Q8IXQ3 194 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF440Q8IYI8 595 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF843Q8N446 348 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 OR4N2Q8NGD1 307 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 M1APQ8TC57 530 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 SLC22A8Q8TCC7 542 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 GIPC3Q8TF64 312 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 DIO2Q92813 273 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 SLC35B4Q969S0 331 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 ADIPOR1Q96A54 375 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 KIAA1143Q96AT1 154 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 C8orf44Q96CB5 159 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 ZNF597Q96LX8 424 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 PRRC1Q96M27 445 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 GABARAPL1Q9H0R8 117 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 HHATLQ9HCP6 504 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 SMPD3Q9NY59 655 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 PDP1Q9P0J1 537 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 FOXJ2Q9P0K8 574 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 TCFL5Q9UL49 500 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 SLC35A3Q9Y2D2 325 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 USP9XQ93008 2570 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 KALRNO60229 2985 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 NUP210LQ5VU65 1888 aa11.29□□□□□ -0.6
MRPL55-227ENST00000475832 NUP214P35658 2090 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-227ENST00000475832 IGHV1-45A0A0A0MS14 117 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 CDHR4A6H8M9 788 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 PEX12O00623 359 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 FMO6PO60774 539 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 CCNB2O95067 398 aa11.28□□□□□ -0.6
MRPL55-227ENST00000475832 OXSR1O95747 527 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-227ENST00000475832 UMODP07911 640 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 1380.7 ms