RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 RNF44Q7L0R7 432 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 TIPARPQ7Z3E1 657 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 IRF2BP2Q7Z5L9 587 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 SPRED2Q7Z698 418 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 RBM23Q86U06 439 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 LDB1Q86U70 411 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 MOGAT3Q86VF5 341 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 CIR1Q86X95 450 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 APCDD1Q8J025 514 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 BCL6BQ8N143 479 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 ANKRD52Q8NB46 1076 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 HSD17B11Q8NBQ5 300 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 OR4Q3Q8NH05 313 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 CYP2W1Q8TAV3 490 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 STT3BQ8TCJ2 826 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 SELENOMQ8WWX9 145 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 TM4SF18Q96CE8 201 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 CMTM7Q96FZ5 175 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 PDLIM5Q96HC4 596 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 C3orf30Q96M34 536 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 PACRGQ96M98 296 aaPredicted RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 WDR92Q96MX6 357 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 TSNAXQ99598 290 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 ALOXE3Q9BYJ1 711 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 SLC29A3Q9BZD2 475 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 DPH1Q9BZG8 443 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 COMMD4Q9H0A8 199 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 C12orf65Q9H3J6 166 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 MUC13Q9H3R2 512 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 TMEM138Q9NPI0 162 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 SLAMF7Q9NQ25 335 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 TM7SF3Q9NS93 570 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 PARPBPQ9NWS1 579 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 CLEC5AQ9NY25 188 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 TBC1D29Q9UFV1 150 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 NAGKQ9UJ70 344 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 OR52A1Q9UKL2 312 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 PLA2G2DQ9UNK4 145 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 TPRKBQ9Y3C4 175 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 SLCO1B1Q9Y6L6 691 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 PKD1L3Q7Z443 1732 aa5.6□□□□□ -1.51
ECHDC1-215ENST00000475319 UBR3Q6ZT12 1888 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 TMEM218A2RU14 115 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 TBC1D3BA6NDS4 549 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 E7EWF7 191 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 SLC16A4O15374 487 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 GRID2O43424 1007 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 PPIHO43447 177 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 RGS10O43665 173 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 XPNPEP2O43895 674 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 DOK2O60496 412 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 GPR32O75388 356 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 GPIP06744 558 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 LIPFP07098 398 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 NPSP0C0P6 89 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 AGAP20933 346 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 FPR1P21462 350 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 LCN1P31025 176 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 MC5RP33032 325 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 FMO5P49326 533 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 LUMP51884 338 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 METAP1P53582 386 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 NAPAP54920 295 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 ERVFRD-1P60508 538 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 RPS6P62753 249 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 SLAQ13239 276 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 IRF3Q14653 427 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 PLAC9Q5JTB6 97 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 FBXO47Q5MNV8 452 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 SAMD4BQ5PRF9 694 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 LGSNQ5TDP6 509 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 TBC1D3GQ6DHY5 549 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 OR8G2PQ6IF36 304 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 CD300LDQ6UXZ3 194 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 DLK2Q6UY11 383 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 GDPD4Q6W3E5 623 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 PTAR1Q7Z6K3 402 aaPredicted RBP5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 WFDC3Q8IUB2 231 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 DDIASQ8IXT1 998 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 OFCC1Q8IZS5 231 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 DCBLD1Q8N8Z6 715 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 TERB2Q8NHR7 220 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 RXFP4Q8TDU9 374 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 ZNF480Q8WV37 535 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 MITD1Q8WV92 249 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 ACOT12Q8WYK0 555 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 SLCO4A1Q96BD0 722 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 SMIM12Q96EX1 92 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 C14orf79Q96F83 325 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 ZNF354BQ96LW1 612 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 VAT1Q99536 393 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 NPAS2Q99743 824 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 MESP1Q9BRJ9 268 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 MARVELD1Q9BSK0 173 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 H2AFJQ9BTM1 129 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 HTATIP2Q9BUP3 242 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 ZNF426Q9BUY5 554 aa5.59□□□□□ -1.51
ECHDC1-215ENST00000475319 MAGEB5Q9BZ81 275 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms