RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CDCP2Q5VXM1 449 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 WDR25Q64LD2 544 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 MTSS1LQ765P7 747 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 GRINAQ7Z429 371 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 NUDCD3Q8IVD9 361 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 HS3ST5Q8IZT8 346 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 PGAM4Q8N0Y7 254 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FBXL13Q8NEE6 735 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 RXFP4Q8TDU9 374 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 AKR1E2Q96JD6 320 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 HRASLS5Q96KN8 279 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CXorf58Q96LI9 332 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 ZFP42Q96MM3 310 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 BARHL1Q9BZE3 327 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FAM86C1Q9NVL1 165 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 SCP2D1Q9UJQ7 156 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FBXL2Q9UKC9 423 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 AMDHD2Q9Y303 409 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 ATG4BQ9Y4P1 393 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 TRBV7-9A0A0J9YWB2 115 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 TEX13DA0A0J9YY54 714 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 A0A1W2PQC6 194 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 A0A1W2PR48 441 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 TTC24A2A3L6 582 aaPredicted RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 KRBOX1C9JBD0 128 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 NFIBO00712 420 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FFAR2O15552 330 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 SCGB1D1O95968 90 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 TOP3BO95985 862 aaKnown RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 C9P02748 559 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 TCRBP04435 133 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 C2P06681 752 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 ADCYAP1P18509 176 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 LHCGRP22888 699 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 GLDCP23378 1020 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CPT2P23786 658 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FHITP49789 147 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 RGS4P49798 205 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CHI3L2Q15782 390 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 HSD17B12Q53GQ0 312 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 NOL9Q5SY16 702 aaKnown RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 LRRC69Q6ZNQ3 347 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 EMC1Q8N766 993 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 CAMKVQ8NCB2 501 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 PAPD5Q8NDF8 572 aaKnown RBP4.55□□□□□ -1.68
NPHP3-206ENST00000474871 OR2L2Q8NH16 312 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 DYNC2LI1Q8TCX1 351 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 SCLYQ96I15 445 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 MAGEB18Q96M61 343 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 VAT1Q99536 393 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 LGR4Q9BXB1 951 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 FTHL17Q9BXU8 183 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 DKK4Q9UBT3 224 aa4.55□□□□□ -1.68
NPHP3-206ENST00000474871 LOC100289279A0A1B0GTE1 492 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 TCRBV16S1A1N1A0A5B0 115 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ELOVL7A1L3X0 281 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 PTGES3LE9PB15 166 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CHP2O43745 196 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 BCHEP06276 602 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ETFAP13804 333 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 HLA-DMAP28067 261 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 RPS19P39019 145 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ETV4P43268 484 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 EIF1AXP47813 144 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 VAMP7P51809 220 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 STXBP1P61764 594 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 DPY19L1Q2PZI1 675 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 TRMT5Q32P41 509 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NDUFAF6Q330K2 333 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 RFTN2Q52LD8 501 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 AGKQ53H12 422 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 FAM111BQ6SJ93 734 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 DHRS11Q6UWP2 260 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CCDC60Q8IWA6 550 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 D2HGDHQ8N465 521 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 FAM98AQ8NCA5 519 aaKnown RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 OR8D4Q8NGM9 314 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NPY6RQ99463 290 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ALG8Q9BVK2 526 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 GANQ9H2C0 597 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 Q9H521 79 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF385DQ9H6B1 395 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 ZNF334Q9HCZ1 680 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SLC25A13Q9UJS0 675 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 PRG3Q9Y2Y8 225 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 DUSP10Q9Y6W6 482 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 A0A1W2PPV4 95 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 OR6C68A6NDL8 312 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NRP1O14786 923 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 GYG2O15488 501 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 FADS1O60427 444 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SEMA7AO75326 666 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CYP7B1O75881 506 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 NDUFB8O95169 186 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 SIX3O95343 332 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 FBXO45P0C2W1 286 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 EPHA3P29320 983 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CALCRP30988 508 aa4.54□□□□□ -1.68
NPHP3-206ENST00000474871 OTX1P32242 354 aaPredicted RBP4.54□□□□□ -1.68
NPHP3-206ENST00000474871 CNR2P34972 360 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms