RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PDLIM1O00151 329 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 ADAM10O14672 748 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 EI24O14681 340 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 LYPD3O95274 346 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 F12P00748 615 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 FTH1P19P0C7X4 201 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 JMJD7P0C870 316 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 THRBP10828 461 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 CEACAM1P13688 526 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 TNFRSF1BP20333 461 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 MMP11P24347 488 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 OR1E2P47887 323 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF136P52737 540 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 IST1P53990 364 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 PSMD4P55036 377 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 SMIM11AP58511 58 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 SLC26A5P58743 744 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 RNF4P78317 190 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 ADARB1P78563 741 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 HPCAP84074 193 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 FGFBP1Q14512 234 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 PCOLCEQ15113 449 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 LRRC36Q1X8D7 754 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 LIN52Q52LA3 116 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 KLHL26Q53HC5 615 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 EIPR1Q53HC9 387 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 COLEC12Q5KU26 742 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 CCNJQ5T5M9 372 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 TMEM164Q5U3C3 297 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 KDM4DQ6B0I6 523 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 FAM199XQ6PEV8 388 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 PAPD4Q6PIY7 484 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 C6orf15Q6UXA7 325 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 USP51Q70EK9 711 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 TSPYL5Q86VY4 417 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 RBM45Q8IUH3 476 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 LACC1Q8IV20 430 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 OFCC1Q8IZS5 231 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 CLIP4Q8N3C7 705 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 MARVELD2Q8N4S9 558 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 ESX1Q8N693 406 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 LSMEM1Q8N8F7 131 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 GALNT6Q8NCL4 622 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 ICA1LQ8NDH6 482 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 DEFB124Q8NES8 71 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 OR4N2Q8NGD1 307 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 OR6T1Q8NGN1 323 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 ELP5Q8TE02 316 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 METTL21AQ8WXB1 218 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 ADAMTS14Q8WXS8 1223 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 DIO2Q92813 273 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 MR1Q95460 341 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 NTNG2Q96CW9 530 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 RMND5BQ96G75 393 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 VMP1Q96GC9 406 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 NAF1Q96HR8 494 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 PRRC1Q96M27 445 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 LPAR4Q99677 370 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 RBM4BQ9BQ04 359 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 TACO1Q9BSH4 297 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 RBM4Q9BWF3 364 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 OSBPL11Q9BXB4 747 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 OR8D2Q9GZM6 311 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 QRSL1Q9H0R6 528 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 NXF5Q9H1B4 397 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 VCXQ9H320 206 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 REEP1Q9H902 201 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 NMNAT1Q9HAN9 279 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 KLHL28Q9NXS3 571 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 COPS7AQ9UBW8 275 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 GPN3Q9UHW5 284 aaPredicted RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 SLC9A8Q9Y2E8 581 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 LRCH1Q9Y2L9 728 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 PCDHGA6Q9Y5G7 932 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 HS3ST3B1Q9Y662 390 aa6.1□□□□□ -1.43
ATG4A-207ENST00000474825 CNOT1A5YKK6 2376 aaKnown RBP6.1□□□□□ -1.43
ATG4A-207ENST00000474825 SERINC4A6NH21 518 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 OR6C70A6NIJ9 312 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 A8MUA0 341 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 CDRT15L2A8MXV6 281 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 J3KTA2 159 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 TNFRSF11BO00300 401 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 PEX12O00623 359 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SOCS6O14544 535 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 GNGT2O14610 69 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SLC16A6O15403 523 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 PRKNO60260 465 aaPredicted RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 DIRAS1O95057 198 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 OR5F1O95221 314 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 NADKO95544 446 aaPredicted RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 OXSR1O95747 527 aaPredicted RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 COX6A1P12074 109 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 IL7RP16871 459 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF23P17027 643 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 TBXA2RP21731 343 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 FUT4P22083 530 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 CBLP22681 906 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 CD82P27701 267 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 RRM2P31350 389 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 DAPP51397 102 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms