RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 KMT2EQ8IZD2 1858 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 A0A0D9SEW6 157 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 GOLGA6L7A0A1B0GV03 622 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LNP1A1A4G5 178 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 HYKKA2RU49 373 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 OR2A25A4D2G3 310 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 GMNCA6NCL1 334 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FAM47DPA6NHR8 397 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 GOLGA6L10A6NI86 522 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SHISA7A6NL88 538 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 A8MUI8 341 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 A8MV72 311 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CDRT15L2A8MXV6 281 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 HACD1B0YJ81 288 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TRIM49D1C9J1S8 452 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 E9PAM4 449 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 GOLGA8TH3BQL2 631 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 DFFAO00273 331 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CCL22O00626 93 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CTDSP2O14595 271 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TRDMT1O14717 391 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ADAMDEC1O15204 470 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PHF1O43189 567 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LATO43561 262 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 AHCYL1O43865 530 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SNX3O60493 162 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 EDF1O60869 148 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MITFO75030 526 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LYPLA1O75608 230 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CABYRO75952 493 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RSL1D1O76021 490 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 WISP3O95389 354 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 AP2A1O95782 977 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FAM107AO95990 144 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 APOEP02649 317 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 IVLP07476 585 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ZDHHC11BP0C7U3 371 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 HSPA8P11142 646 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CD1EP15812 388 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PORP16435 677 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 HMGA1P17096 107 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ALOX12P18054 663 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PGAM1P18669 254 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 BGNP21810 368 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 DNAJB1P25685 340 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SLC6A6P31641 620 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RPL9P32969 192 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CA5AP35218 305 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ADRA1AP35348 466 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FDFT1P37268 417 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PSMB10P40306 273 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CETN2P41208 172 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CCR2P41597 374 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SLC1A2P43004 574 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RGRP47804 291 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 NRIP1P48552 1158 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LHX1P48742 406 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MFAP4P55083 255 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ARPP19P56211 112 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MAXP61244 160 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 NCALDP61601 193 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RPL10AP62906 217 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ARF5P84085 180 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CAV1Q03135 178 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 AP1B1Q10567 949 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TAF10Q12962 218 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 IFT88Q13099 833 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 AIMP2Q13155 320 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 DNAJC3Q13217 504 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PLD1Q13393 1074 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MSLNQ13421 630 aaPredicted RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 XRCC4Q13426 336 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 TFDP2Q14188 446 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MELKQ14680 651 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PCLAFQ15004 111 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RASA2Q15283 850 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SHHQ15465 462 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PSMD5Q16401 504 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PDK4Q16654 411 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC26Q2I0M4 334 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 KLHL38Q2WGJ6 581 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PHLDA2Q53GA4 152 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 BOLA3Q53S33 107 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ODF2Q5BJF6 829 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF789Q5FWF6 425 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MS4A13Q5J8X5 152 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 BRMS1LQ5PSV4 323 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ANKRD20A2Q5SQ80 823 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ANKRD20A1Q5TYW2 823 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LCN1P1Q5VSP4 162 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ANKRD20A3Q5VUR7 823 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 SLC8B1Q6J4K2 584 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RWDD4Q6NW29 188 aaKnown RBP1.27□□□□□ -2.21
CCDC39-203ENST00000473854 MZT2BQ6NZ67 158 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC8BQ6P9F7 803 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 DCLRE1AQ6PJP8 1040 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 LEKR1Q6ZMV7 388 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 RGS9BPQ6ZS82 235 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ZCCHC23Q6ZST2 131 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 CENPUQ71F23 418 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms