RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ELOVL4Q9GZR5 314 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 AZI2Q9H6S1 392 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 DCTPP1Q9H773 170 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 UCK1Q9HA47 277 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 IL1RAPL2Q9NP60 686 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 FAM114A2Q9NRY5 505 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.83□□□□□ -1.96
CD46-213ENST00000471987 DNAJB9Q9UBS3 223 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 CD300AQ9UGN4 299 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 PSORS1C1Q9UIG5 152 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 RNF115Q9Y4L5 304 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 COMMD3-BMI1R4GMX3 469 aa2.83□□□□□ -1.96
CD46-213ENST00000471987 GOLGA6L4A6NEF3 574 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 NDUFAB1O14561 156 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 ZNF263O14978 683 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 ZW10O43264 779 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 REC8O95072 547 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 OR5F1O95221 314 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 SLC2A10O95528 541 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 IVLP07476 585 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 RALAP11233 206 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 CCDC130P13994 396 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 IDSP22304 550 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 CHMLP26374 656 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 PTBP1P26599 531 aaKnown RBP eCLIP2.82□□□□□ -1.961e-8■■□□□ 11.8
CD46-213ENST00000471987 AXLP30530 894 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 HOXA6P31267 233 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 CCT6AP40227 531 aaKnown RBP2.82□□□□□ -1.96
CD46-213ENST00000471987 CASP3P42574 277 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 RABIFP47224 123 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 OR1G1P47890 313 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 ATXN3P54252 364 aaPredicted RBP2.82□□□□□ -1.96
CD46-213ENST00000471987 PRRX1P54821 245 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 LRRC63Q05C16 580 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 DNAJC3Q13217 504 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 PLD1Q13393 1074 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 CUL1Q13616 776 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 HEPACAMQ14CZ8 416 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 NCF4Q15080 339 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 AANATQ16613 207 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 Q3ZCU0 254 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 LRRC23Q53EV4 343 aaPredicted RBP2.82□□□□□ -1.96
CD46-213ENST00000471987 SPATA46Q5T0L3 261 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 C1orf185Q5T7R7 199 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 AGBL2Q5U5Z8 902 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 LRRC38Q5VT99 294 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 METAP1DQ6UB28 335 aaPredicted RBP2.82□□□□□ -1.96
CD46-213ENST00000471987 SASS6Q6UVJ0 657 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 TAS2R42Q7RTR8 314 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 ERICH1Q86X53 443 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 SLC22A9Q8IVM8 553 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 ITPRIPQ8IWB1 547 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 AQP12AQ8IXF9 295 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 KLHL7Q8IXQ5 586 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 TTC5Q8N0Z6 440 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 FAM133AQ8N9E0 248 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 LPCAT1Q8NF37 534 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 DTNBP1Q96EV8 351 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 TSG101Q99816 390 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 CTRCQ99895 268 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 ERP44Q9BS26 406 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 SLC25A39Q9BZJ4 359 aaPredicted RBP2.82□□□□□ -1.96
CD46-213ENST00000471987 ABCG8Q9H221 673 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 ZDHHC6Q9H6R6 413 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 SRD5A3Q9H8P0 318 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 SLC39A1Q9NY26 324 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 TMOD2Q9NZR1 351 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 MAD2L2Q9UI95 211 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 APPL1Q9UKG1 709 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 NEU3Q9UQ49 428 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 CBY1Q9Y3M2 126 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 AFF2P51816 1311 aa2.82□□□□□ -1.96
CD46-213ENST00000471987 A0A1W2PRV1 198 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 SH3PXD2BA1X283 911 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 HEATR9A2RTY3 570 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 A4D1N5 150 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 E9PMD0 336 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 EEF2KO00418 725 aaKnown RBP2.81□□□□□ -1.96
CD46-213ENST00000471987 CXCL11O14625 94 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 ATP9AO75110 1047 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 ZNF189O75820 626 aaPredicted RBP2.81□□□□□ -1.96
CD46-213ENST00000471987 CPNE6O95741 557 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 OPN1LWP04000 364 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 FCER2P06734 321 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 FGF4P08620 206 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 HMOX1P09601 288 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 GHRP10912 638 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 PSG2P11465 335 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 ANXA8P13928 327 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 IGFBP5P24593 272 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 MSNP26038 577 aaKnown RBP2.81□□□□□ -1.96
CD46-213ENST00000471987 ANXA13P27216 316 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 CCR1P32246 355 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 PITPNBP48739 271 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 TPM4P67936 248 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 CDKL1Q00532 357 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 ELP6Q0PNE2 266 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 NPRL3Q12980 569 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 GPM6BQ13491 265 aa2.81□□□□□ -1.96
CD46-213ENST00000471987 EBI3Q14213 229 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms