RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 CCL11P51671 97 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 POLE2P56282 527 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 LSM11P83369 360 aaKnown RBP eCLIP9.04□□□□□ -0.96
SF3A1-207ENST00000471342 MXRA7P84157 204 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 FOXK1P85037 733 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 VLDLRP98155 873 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 BNIP2Q12982 314 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 MFAP5Q13361 173 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 RAPSNQ13702 412 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ELOAQ14241 798 aaKnown RBP9.04□□□□□ -0.96
SF3A1-207ENST00000471342 CYP51A1Q16850 503 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 TMEM44Q2T9K0 475 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 CYBRD1Q53TN4 286 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 PDZK1Q5T2W1 519 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 RNF220Q5VTB9 566 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 SPINK14Q6IE38 97 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 HMBOX1Q6NT76 420 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 CYP2R1Q6VVX0 501 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 CCDC81Q6ZN84 652 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 NUP54Q7Z3B4 507 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF605Q86T29 641 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 MARCH3Q86UD3 253 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 GRAMD2AQ8IUY3 354 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 RBMXL3Q8N7X1 1067 aaKnown RBP9.04□□□□□ -0.96
SF3A1-207ENST00000471342 EXD3Q8N9H8 876 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 FADS6Q8N9I5 356 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 SMYD1Q8NB12 490 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 OR52P1PQ8NH57 321 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 BBS10Q8TAM1 723 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ZCCHC14Q8WYQ9 949 aaKnown RBP9.04□□□□□ -0.96
SF3A1-207ENST00000471342 FIG4Q92562 907 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 JADE3Q92613 823 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 SCMH1Q96GD3 660 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ANGPTL4Q9BY76 406 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 GALNT9Q9HCQ5 603 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 MAN2C1Q9NTJ4 1040 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ANKRD10Q9NXR5 420 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ACAD8Q9UKU7 415 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF443Q9Y2A4 671 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-207ENST00000471342 NTNG1Q9Y2I2 539 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 DSPP15924 2871 aaKnown RBP9.04□□□□□ -0.96
SF3A1-207ENST00000471342 SMG1Q96Q15 3661 aaKnown RBP9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ITPR1Q14643 2758 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 CPAMD8Q8IZJ3 1885 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 ACACBO00763 2458 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 PKD1L2Q7Z442 2459 aa9.04□□□□□ -0.96
SF3A1-207ENST00000471342 USP24Q9UPU5 2620 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 EXPH5Q8NEV8 1989 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 ANKRD33BA6NCL7 494 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 C2orf72A6NCS6 295 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 CFAP73A6NFT4 308 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 SERINC4A6NH21 518 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 A6NL46 340 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 AQP12BA6NM10 295 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 AP3D1O14617 1153 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 FRS3O43559 492 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 DYRK3O43781 588 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 REM1O75628 298 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 GLSO94925 669 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-207ENST00000471342 FESP07332 822 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 ITGA3P26006 1051 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 LIMS1P48059 325 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 CRISP3P54108 245 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 RHDQ02161 417 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 PLCXD2Q0VAA5 305 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 GPR68Q15743 365 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 TOMM34Q15785 309 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-207ENST00000471342 MEP1AQ16819 746 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 GPAT3Q53EU6 434 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 RNFT1Q5M7Z0 435 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 MRPL2Q5T653 305 aaKnown RBP9.03□□□□□ -0.96
SF3A1-207ENST00000471342 ANGPTL8Q6UXH0 198 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 IL20RBQ6UXL0 311 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 AQP12AQ8IXF9 295 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 SLC5A8Q8N695 610 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 OR6T1Q8NGN1 323 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 POC1BQ8TC44 478 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 OIT3Q8WWZ8 545 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 DHRS1Q96LJ7 313 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 ZNF354BQ96LW1 612 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 DCBLD2Q96PD2 775 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 SECISBP2Q96T21 854 aaKnown RBP9.03□□□□□ -0.96
SF3A1-207ENST00000471342 DOHHQ9BU89 302 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 AMBRA1Q9C0C7 1298 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 UBQLN3Q9H347 655 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 UBQLN4Q9NRR5 601 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 CCM2LQ9NUG4 571 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-207ENST00000471342 EXD2Q9NVH0 621 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 GPR83Q9NYM4 423 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 STMN3Q9NZ72 180 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 NDUFAF4Q9P032 175 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 MAGEL2Q9UJ55 1249 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 ZMIZ1Q9ULJ6 1067 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 DTNAQ9Y4J8 743 aa9.03□□□□□ -0.96
SF3A1-207ENST00000471342 PCDHGA9Q9Y5G4 932 aaKnown RBP9.03□□□□□ -0.96
SF3A1-207ENST00000471342 TMEM8BA6NDV4 472 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 J3KTA2 159 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 SYT5O00445 386 aa9.02□□□□□ -0.97
SF3A1-207ENST00000471342 ZIC3O60481 467 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms