RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PAPOLBQ9NRJ5 636 aaKnown RBP8.67□□□□□ -1.02
VPS52-216ENST00000471309 RLIMQ9NVW2 624 aa8.67□□□□□ -1.02
VPS52-216ENST00000471309 TOR4AQ9NXH8 423 aa8.67□□□□□ -1.02
VPS52-216ENST00000471309 GPN3Q9UHW5 284 aaPredicted RBP8.67□□□□□ -1.02
VPS52-216ENST00000471309 SCOCQ9UIL1 159 aa8.67□□□□□ -1.02
VPS52-216ENST00000471309 MGAT4BQ9UQ53 548 aa8.67□□□□□ -1.02
VPS52-216ENST00000471309 PCDHGB5Q9Y5G0 923 aa8.67□□□□□ -1.02
VPS52-216ENST00000471309 CCDC187A0A096LP49 1063 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 LOC100130705A0A1B0GUX0 176 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 SH3PXD2BA1X283 911 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 CLDN24A6NM45 220 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 CPSF4LA6NMK7 179 aaKnown RBP8.66□□□□□ -1.02
VPS52-216ENST00000471309 BCKDKO14874 412 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 TPST2O60704 377 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 CSO75390 466 aaKnown RBP8.66□□□□□ -1.02
VPS52-216ENST00000471309 CLIC3O95833 236 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 ITIH1P19827 911 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 TGM1P22735 817 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 NBL1P41271 181 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 FOXL2P58012 376 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 IL1RL1Q01638 556 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 ST3GAL3Q11203 375 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 NCF4Q15080 339 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 SEC23BQ15437 767 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 CCDC157Q569K6 752 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 ENTPD8Q5MY95 495 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 ZNF691Q5VV52 312 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 FAAH2Q6GMR7 532 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 CPEB2Q7Z5Q1 589 aaKnown RBP8.66□□□□□ -1.02
VPS52-216ENST00000471309 GLRX5Q86SX6 157 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 SLCO6A1Q86UG4 719 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 ZNF527Q8NB42 609 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 SETD9Q8NE22 299 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 NFAM1Q8NET5 270 aaPredicted RBP8.66□□□□□ -1.02
VPS52-216ENST00000471309 OR4K5Q8NGD3 323 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 ADAMTS16Q8TE57 1224 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 MR1Q95460 341 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 SLC38A4Q969I6 547 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 TP53INP1Q96A56 240 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 HSPBAP1Q96EW2 488 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 VMP1Q96GC9 406 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 MUS81Q96NY9 551 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 TAAR9Q96RI9 348 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 GAL3ST4Q96RP7 486 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 NIPSNAP1Q9BPW8 284 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 WDR77Q9BQA1 342 aaPredicted RBP8.66□□□□□ -1.02
VPS52-216ENST00000471309 DGCR6LQ9BY27 220 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 BATF3Q9NR55 127 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.66□□□□□ -1.02
VPS52-216ENST00000471309 DNAJB12Q9NXW2 375 aaKnown RBP8.66□□□□□ -1.02
VPS52-216ENST00000471309 MYRFQ9Y2G1 1151 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 PCDHGA3Q9Y5H0 932 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 B3GALT1Q9Y5Z6 326 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 HSPE1-MOB4S4R3N1 261 aa8.66□□□□□ -1.02
VPS52-216ENST00000471309 CCDC88CQ9P219 2028 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 LOC102723996A0A087X1L8 192 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 IGHV3-20A0A0C4DH32 117 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 TRAPPC13A5PLN9 417 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 SERINC4A6NH21 518 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 H3BNH8 94 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 OR10H3O60404 316 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 CYP7B1O75881 506 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 STK17BO94768 372 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 DLGAP3O95886 979 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 MT-CO3P00414 261 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 CD63P08962 238 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 JMJD7P0C870 316 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 PRG2P13727 222 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 HTR2AP28223 471 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 RYKP34925 604 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 POLR2IP36954 125 aaKnown RBP8.65□□□□□ -1.02
VPS52-216ENST00000471309 ADH7P40394 386 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 ETV5P41161 510 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 CLK3P49761 638 aaKnown RBP8.65□□□□□ -1.02
VPS52-216ENST00000471309 UGT2B15P54855 530 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 TPD52P55327 224 aaPredicted RBP8.65□□□□□ -1.02
VPS52-216ENST00000471309 NUP107P57740 925 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 SLC26A5P58743 744 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 RNF4P78317 190 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 NPRL3Q12980 569 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 KCTD21Q4G0X4 260 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 PGBD2Q6P3X8 592 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 TMEM154Q6P9G4 183 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 PODNL1Q6PEZ8 512 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 TTC33Q6PID6 262 aaPredicted RBP8.65□□□□□ -1.02
VPS52-216ENST00000471309 PAPD4Q6PIY7 484 aaKnown RBP8.65□□□□□ -1.02
VPS52-216ENST00000471309 GDF7Q7Z4P5 450 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 THAP5Q7Z6K1 395 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 SLC34A3Q8N130 599 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 ZNF614Q8N883 585 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 GALNT6Q8NCL4 622 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 APCDD1LQ8NCL9 501 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 FAM71CQ8NEG0 241 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 OR8K3Q8NH51 312 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 NUBPLQ8TB37 319 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 FBLIM1Q8WUP2 373 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 CNOT9Q92600 299 aaKnown RBP8.65□□□□□ -1.02
VPS52-216ENST00000471309 EFHD2Q96C19 240 aaPredicted RBP8.65□□□□□ -1.02
VPS52-216ENST00000471309 HRASLS5Q96KN8 279 aa8.65□□□□□ -1.02
VPS52-216ENST00000471309 LMF1Q96S06 567 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms