RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 DDX50Q9BQ39 737 aaKnown RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 ZNF670Q9BS34 389 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CHCHD5Q9BSY4 110 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 SNRNP25Q9BV90 132 aaKnown RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 FRMD8P1Q9BZ68 369 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 OSBPL8Q9BZF1 889 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 DHX35Q9H5Z1 703 aaKnown RBP4.37□□□□□ -1.71
CCDC39-202ENST00000471307 HEXA-AS1Q9H8Q6 139 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 GPR83Q9NYM4 423 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 GTSE1Q9NYZ3 720 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 COX16Q9P0S2 106 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 OR12D3Q9UGF7 316 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 MTCH2Q9Y6C9 303 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 CROCCQ5TZA2 2017 aa4.37□□□□□ -1.71
CCDC39-202ENST00000471307 ATG2AQ2TAZ0 1938 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 LAMA3Q16787 3333 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 NUP205Q92621 2012 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 hCG_1818297A0A087WSY0 165 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CTAGE15A4D2H0 777 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 EEF2KO00418 725 aaKnown RBP4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ACSL4O60488 711 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 SNAP91O60641 907 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CST8O60676 142 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 KERAO60938 352 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ATP6AP2O75787 350 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ZNF189O75820 626 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-202ENST00000471307 KRTAP1-4P0C5Y4 121 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 FOLR2P14207 255 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CCR2P41597 374 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ZFP36L1Q07352 338 aaKnown RBP4.36□□□□□ -1.71
CCDC39-202ENST00000471307 DPYSL3Q14195 570 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 FAM189A2Q15884 450 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ANKRD20A8PQ5CZ79 823 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 DNAJC21Q5F1R6 531 aaKnown RBP4.36□□□□□ -1.71
CCDC39-202ENST00000471307 RAB12Q6IQ22 244 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 TRAT1Q6PIZ9 186 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ZNF841Q6ZN19 808 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ZBTB49Q6ZSB9 765 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 GLRX5Q86SX6 157 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CTAGE6Q86UF2 777 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CMTM8Q8IZV2 173 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 PYROXD2Q8N2H3 581 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 MMGT1Q8N4V1 131 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CAMKVQ8NCB2 501 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 SPATA4Q8NEY3 305 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CCDC26Q8TAB7 109 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ZPLD1Q8TCW7 415 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-202ENST00000471307 P3H4Q92791 437 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 TCEAL4Q96EI5 215 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 MS4A14Q96JA4 679 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CAPZA3Q96KX2 299 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 RUNDC3BQ96NL0 473 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CSPG4P5Q96PW8 444 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 BTBD9Q96Q07 612 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 MYCBPQ99417 103 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CARD6Q9BX69 1037 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 CALN1Q9BXU9 219 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 SLC2A11Q9BYW1 496 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ACTL8Q9H568 366 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 LRRC19Q9H756 370 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 ABCB8Q9NUT2 735 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 GPATCH2LQ9NWQ4 482 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 HPF1Q9NWY4 346 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 THAP10Q9P2Z0 257 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-202ENST00000471307 STOML2Q9UJZ1 356 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 LSM7Q9UK45 103 aaKnown RBP4.36□□□□□ -1.71
CCDC39-202ENST00000471307 OBSL1O75147 1896 aa4.36□□□□□ -1.71
CCDC39-202ENST00000471307 BRWD1Q9NSI6 2320 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 DOCK4Q8N1I0 1966 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 IQCMA0A1B0GVH7 501 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 SRRM5B3KS81 715 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 E9PAM4 449 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 G3V2L1 256 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 APOC4-APOC2K7ER74 178 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 SLC9A3R1O14745 358 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-202ENST00000471307 ZBTB14O43829 449 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 NXPH4O95158 308 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 MOCS2O96007 188 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-202ENST00000471307 APOC2P02655 101 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 GOT1P17174 413 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 MAPK3P27361 379 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-202ENST00000471307 STIP1P31948 543 aaKnown RBP4.35□□□□□ -1.71
CCDC39-202ENST00000471307 CHRNA3P32297 505 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 SERPINB6P35237 376 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 FNTAP49354 379 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 NPY4RP50391 375 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 TPI1P60174 286 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 NTHL1P78549 312 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 RALGDSQ12967 914 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 CBX3Q13185 183 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 XRCC4Q13426 336 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 DPYSQ14117 519 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 NFE2L1Q14494 772 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 PAFAH1B3Q15102 231 aaKnown RBP4.35□□□□□ -1.71
CCDC39-202ENST00000471307 SIX1Q15475 284 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-202ENST00000471307 HYAL4Q2M3T9 481 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 NHSL2Q5HYW2 709 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 MS4A13Q5J8X5 152 aa4.35□□□□□ -1.71
CCDC39-202ENST00000471307 FGD3Q5JSP0 725 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms