RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 SH3YL1Q96HL8 342 aaPredicted RBP12.14□□□□□ -0.47
EFNA1-203ENST00000469878 METTL2AQ96IZ6 378 aaKnown RBP12.14□□□□□ -0.47
EFNA1-203ENST00000469878 TMEM185BQ9H7F4 350 aa12.14□□□□□ -0.47
EFNA1-203ENST00000469878 PTGES2Q9H7Z7 377 aa12.14□□□□□ -0.47
EFNA1-203ENST00000469878 MKS1Q9NXB0 559 aa12.14□□□□□ -0.47
EFNA1-203ENST00000469878 MRTO4Q9UKD2 239 aaKnown RBP12.14□□□□□ -0.47
EFNA1-203ENST00000469878 CLEC4AQ9UMR7 237 aa12.14□□□□□ -0.47
EFNA1-203ENST00000469878 TRAF6Q9Y4K3 522 aa12.14□□□□□ -0.47
EFNA1-203ENST00000469878 FLNAP21333 2647 aaKnown RBP12.14□□□□□ -0.47
EFNA1-203ENST00000469878 NPIPA5A0A0B4J1W7 369 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 ALG1L2C9J202 215 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 NPIPA7E9PJI5 369 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 EIF1AYO14602 144 aaKnown RBP12.13□□□□□ -0.47
EFNA1-203ENST00000469878 OIP5O43482 229 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 NDUFB5O43674 189 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 TNFRSF21O75509 655 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 SKAP2O75563 359 aaPredicted RBP12.13□□□□□ -0.47
EFNA1-203ENST00000469878 NPIPA8P0DM63 369 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 LAMP1P11279 417 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 PSMA4P25789 261 aaKnown RBP12.13□□□□□ -0.47
EFNA1-203ENST00000469878 SHC1P29353 583 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 CD79BP40259 229 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 PSMD4P55036 377 aaKnown RBP12.13□□□□□ -0.47
EFNA1-203ENST00000469878 C17orf67Q0P5P2 114 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 CTU2Q2VPK5 515 aaKnown RBP12.13□□□□□ -0.47
EFNA1-203ENST00000469878 XKR7Q5GH72 579 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 ANKRD34AQ69YU3 496 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 OR2A2Q6IF42 318 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 LSRQ86X29 649 aaPredicted RBP12.13□□□□□ -0.47
EFNA1-203ENST00000469878 CDRT4Q8N9R6 151 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 ZFP28Q8NHY6 868 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 POC1BQ8TC44 478 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 FAM110BQ8TC76 370 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 TCP10LQ8TDR4 215 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 JADE3Q92613 823 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 CDS1Q92903 461 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 ZC3HAV1LQ96H79 300 aaKnown RBP12.13□□□□□ -0.47
EFNA1-203ENST00000469878 POM121Q96HA1 1249 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 ADGRG7Q96K78 797 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 HS3ST6Q96QI5 342 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 SMR3AQ99954 134 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 IQCGQ9H095 443 aaKnown RBP12.13□□□□□ -0.47
EFNA1-203ENST00000469878 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 C3orf14Q9HBI5 128 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 NTMQ9P121 344 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 MID2Q9UJV3 735 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 ZNF175Q9Y473 711 aa12.13□□□□□ -0.47
EFNA1-203ENST00000469878 RAI1Q7Z5J4 1906 aaPredicted RBP12.13□□□□□ -0.47
EFNA1-203ENST00000469878 SCAMP2O15127 329 aaKnown RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 EMC8O43402 210 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 NPHS1O60500 1241 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 PEX11AO75192 247 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 SLU7O95391 586 aaKnown RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 HMGN2P05204 90 aaKnown RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 CRHP06850 196 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 POU2F1P14859 743 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 UGT2B10P36537 528 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 EIF1AXP47813 144 aaKnown RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 CLK3P49761 638 aaKnown RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 LASP1Q14847 261 aaKnown RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 PLPPR5Q32ZL2 321 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 CAMKMTQ7Z624 323 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 CXorf67Q86X51 503 aaPredicted RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 KRTCAP2Q8N6L1 136 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 COX18Q8N8Q8 333 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 OR10D3Q8NH80 312 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 ZBTB9Q96C00 473 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 ZNF524Q96C55 264 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 RNF145Q96MT1 663 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 TRMOQ9BU70 441 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 CXorf36Q9H7Y0 433 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 ACSS1Q9NUB1 689 aaPredicted RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 ZCCHC3Q9NUD5 404 aaKnown RBP12.12□□□□□ -0.47
EFNA1-203ENST00000469878 GIN1Q9NXP7 522 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 ZDHHC2Q9UIJ5 367 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 KCNE3Q9Y6H6 103 aa12.12□□□□□ -0.47
EFNA1-203ENST00000469878 HEATR5AQ86XA9 2040 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 NUP214P35658 2090 aaPredicted RBP12.11□□□□□ -0.47
EFNA1-203ENST00000469878 A0A1W2PRB8 838 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 TTC36A6NLP5 189 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 TNFSF11O14788 317 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 CXCL13O43927 109 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 CHEK2O96017 543 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 FGF4P08620 206 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 ALOX5P09917 674 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 NUDT17P0C025 328 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 HOXB4P17483 251 aaPredicted RBP12.11□□□□□ -0.47
EFNA1-203ENST00000469878 TBXA2RP21731 343 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 LOXP28300 417 aaPredicted RBP12.11□□□□□ -0.47
EFNA1-203ENST00000469878 KCNJ5P48544 419 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 PRIM2P49643 509 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 EEFSECP57772 596 aaKnown RBP12.11□□□□□ -0.47
EFNA1-203ENST00000469878 SGCBQ16585 318 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 EXOC3L2Q2M3D2 409 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 NDUFAF6Q330K2 333 aa12.11□□□□□ -0.47
EFNA1-203ENST00000469878 GLYR1Q49A26 553 aaPredicted RBP12.11□□□□□ -0.47
EFNA1-203ENST00000469878 VPS26BQ4G0F5 336 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms