RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 RPAP3Q9H6T3 665 aaPredicted RBP3.51□□□□□ -1.85
XRN1-207ENST00000468894 PTGES2Q9H7Z7 377 aa3.51□□□□□ -1.85
XRN1-207ENST00000468894 UTP6Q9NYH9 597 aaKnown RBP3.51□□□□□ -1.85
XRN1-207ENST00000468894 SAMD4AQ9UPU9 718 aaKnown RBP3.51□□□□□ -1.85
XRN1-207ENST00000468894 PPIAL4AQ9Y536 164 aa3.51□□□□□ -1.85
XRN1-207ENST00000468894 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 UBE4BO95155 1302 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 ARHGAP23Q9P227 1491 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 PINLYPA6NC86 204 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 TRIM3O75382 744 aaPredicted RBP3.5□□□□□ -1.85
XRN1-207ENST00000468894 GPX5O75715 221 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 MT-ATP6P00846 226 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 MT-ND3P03897 115 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 GSTT2P0CG29 244 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 GSTT2BP0CG30 244 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 VDRP11473 427 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 BCKDHAP12694 445 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 VDAC1P21796 283 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 ADORA2BP29275 332 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 ZNF45Q02386 682 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 EXOSC2Q13868 293 aaKnown RBP3.5□□□□□ -1.85
XRN1-207ENST00000468894 ELAVL3Q14576 367 aaKnown RBP3.5□□□□□ -1.85
XRN1-207ENST00000468894 LDLRAP1Q5SW96 308 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 DCST2Q5T1A1 773 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 PLBD1Q6P4A8 553 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 CASC1Q6TDU7 716 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 LPCAT2Q7L5N7 544 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 KDM8Q8N371 416 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 ANKRD20A12PQ8NF67 263 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 RNF138Q8WVD3 245 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 MARC2Q969Z3 335 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 OR51J1Q9H342 316 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 ROPN1Q9HAT0 212 aaPredicted RBP3.5□□□□□ -1.85
XRN1-207ENST00000468894 OR1A1Q9P1Q5 309 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 GMPPBQ9Y5P6 360 aa3.5□□□□□ -1.85
XRN1-207ENST00000468894 TBL1XO60907 577 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 TIMP1P01033 207 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 CHRNA1P02708 482 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 IGLL1P15814 213 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 MDKP21741 143 aaPredicted RBP3.49□□□□□ -1.85
XRN1-207ENST00000468894 RPL29P47914 159 aaKnown RBP3.49□□□□□ -1.85
XRN1-207ENST00000468894 NOVA1P51513 510 aaKnown RBP3.49□□□□□ -1.85
XRN1-207ENST00000468894 CYS1Q717R9 158 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 PPP1R27Q86WC6 154 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 C17orf82Q86X59 251 aaPredicted RBP3.49□□□□□ -1.85
XRN1-207ENST00000468894 EFCAB13Q8IY85 973 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 FAM71CQ8NEG0 241 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 OR2A12Q8NGT7 310 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 FCGR1BQ92637 280 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 NEIL2Q969S2 332 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 FGGYQ96C11 551 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 SDHCQ99643 169 aaPredicted RBP3.49□□□□□ -1.85
XRN1-207ENST00000468894 NFKBIZQ9BYH8 718 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 RSPH9Q9H1X1 276 aaPredicted RBP3.49□□□□□ -1.85
XRN1-207ENST00000468894 CAB39LQ9H9S4 337 aa3.49□□□□□ -1.85
XRN1-207ENST00000468894 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.49□□□□□ -1.85
XRN1-207ENST00000468894 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.49□□□□□ -1.85
XRN1-207ENST00000468894 WASHC1A8K0Z3 465 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 SSX5O60225 188 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 MMP23AO75900 390 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 TGFAP01135 160 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 HOXC4P09017 264 aaPredicted RBP3.48□□□□□ -1.85
XRN1-207ENST00000468894 ANXA3P12429 323 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 NR2C1P13056 603 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 ETS1P14921 441 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 RBMXP38159 391 aaKnown RBP3.48□□□□□ -1.85
XRN1-207ENST00000468894 MRPS11P82912 194 aaKnown RBP3.48□□□□□ -1.85
XRN1-207ENST00000468894 EIF4EBP2Q13542 120 aaPredicted RBP3.48□□□□□ -1.85
XRN1-207ENST00000468894 CELF3Q5SZQ8 465 aaKnown RBP3.48□□□□□ -1.85
XRN1-207ENST00000468894 TRUB1Q8WWH5 349 aaKnown RBP3.48□□□□□ -1.85
XRN1-207ENST00000468894 SAMD8Q96LT4 415 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 SMIM14Q96QK8 99 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 NICN1Q9BSH3 213 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 SPXQ9BT56 116 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 POLR3FQ9H1D9 316 aaPredicted RBP3.48□□□□□ -1.85
XRN1-207ENST00000468894 COG4Q9H9E3 785 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 SOHLH2Q9NX45 425 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 FOXJ3Q9UPW0 622 aa3.48□□□□□ -1.85
XRN1-207ENST00000468894 ABCC4O15439 1325 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 IGHV7-81A0A0B4J1V7 117 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 BICDL2A1A5D9 508 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 TUBAL3A6NHL2 446 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 STX11O75558 287 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 OR8U8P0C7N1 319 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 H2AFXP16104 143 aaPredicted RBP3.47□□□□□ -1.85
XRN1-207ENST00000468894 GNPDA1P46926 289 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 DHPSP49366 369 aaPredicted RBP3.47□□□□□ -1.85
XRN1-207ENST00000468894 AANATQ16613 207 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 LRRC36Q1X8D7 754 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 ZNF658BQ4V348 819 aaPredicted RBP3.47□□□□□ -1.85
XRN1-207ENST00000468894 OR8G2PQ6IF36 304 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 ZNF589Q86UQ0 364 aaPredicted RBP3.47□□□□□ -1.85
XRN1-207ENST00000468894 SKA3Q8IX90 412 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 RNF175Q8N4F7 328 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 ZSCAN4Q8NAM6 433 aaPredicted RBP3.47□□□□□ -1.85
XRN1-207ENST00000468894 STKLD1Q8NE28 680 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 RSPH1Q8WYR4 309 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 ANP32EQ9BTT0 268 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 GLIPR2Q9H4G4 154 aa3.47□□□□□ -1.85
XRN1-207ENST00000468894 ACTR8Q9H981 624 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms