RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 MLLT1Q03111 559 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-214ENST00000468619 SLC8B1Q6J4K2 584 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 SLITRK4Q8IW52 837 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 HORMAD2Q8N7B1 307 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 BOLLQ8N9W6 283 aaKnown RBP12.54□□□□□ -0.4
SHANK2-214ENST00000468619 OR4D9Q8NGE8 314 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 GOT1L1Q8NHS2 421 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-214ENST00000468619 FOXJ1Q92949 421 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 FBXO32Q969P5 355 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 TMEM19Q96HH6 336 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 FAIM2Q9BWQ8 316 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 SEMA4CQ9C0C4 833 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 SMG9Q9H0W8 520 aaKnown RBP12.54□□□□□ -0.4
SHANK2-214ENST00000468619 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 ASB6Q9NWX5 421 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 CEP290O15078 2479 aa12.54□□□□□ -0.4
SHANK2-214ENST00000468619 FXYD6-FXYD2A0A087WZ82 144 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 CHST10O43529 356 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 TIA1P31483 386 aaKnown RBP eCLIP12.53□□□□□ -0.4
SHANK2-214ENST00000468619 MAPK9P45984 424 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 CAPZA2P47755 286 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 FNTBP49356 437 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 RPS13P62277 151 aaKnown RBP12.53□□□□□ -0.4
SHANK2-214ENST00000468619 LGALS3BPQ08380 585 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 GK2Q14410 553 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-214ENST00000468619 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 SLC27A4Q6P1M0 643 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 SMARCD3Q6STE5 483 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 MMP21Q8N119 569 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 MEIOBQ8N635 442 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 GANCQ8TET4 914 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 ASZ1Q8WWH4 475 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 PPCDCQ96CD2 204 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 TBX5Q99593 518 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 TREX2Q9BQ50 279 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-214ENST00000468619 ORAI3Q9BRQ5 295 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 FXYD6Q9H0Q3 95 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 MTG2Q9H4K7 406 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 NPDC1Q9NQX5 325 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-214ENST00000468619 NFKBIL1Q9UBC1 381 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-214ENST00000468619 CHD9Q3L8U1 2897 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 IRGMA1A4Y4 181 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 RHOCP08134 193 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 SEC61A1P61619 476 aaKnown RBP12.53□□□□□ -0.4
SHANK2-214ENST00000468619 DHODHQ02127 395 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 GSG1LQ6UXU4 331 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 OLIG3Q7RTU3 272 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 PRICKLE2Q7Z3G6 844 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 SYT9Q86SS6 491 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 KRT78Q8N1N4 520 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 NXPE3Q969Y0 559 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 TM6SF2Q9BZW4 377 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 EXOSC3Q9NQT5 275 aaKnown RBP12.53□□□□□ -0.4
SHANK2-214ENST00000468619 NDRG3Q9UGV2 375 aa12.53□□□□□ -0.4
SHANK2-214ENST00000468619 FCF1Q9Y324 198 aaKnown RBP12.53□□□□□ -0.4
SHANK2-214ENST00000468619 A0A1W2PRB8 838 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 SERTM1A2A2V5 107 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 GALR3O60755 368 aaPredicted RBP12.52□□□□□ -0.4
SHANK2-214ENST00000468619 GPR37L1O60883 481 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 HPP00738 406 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 SNRPBP14678 240 aaKnown RBP12.52□□□□□ -0.4
SHANK2-214ENST00000468619 TBXA2RP21731 343 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 MMP15P51511 669 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 SGSHP51688 502 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 RIPPLY1Q0D2K3 151 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 TAF10Q12962 218 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 FZD5Q13467 585 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 KLF9Q13886 244 aaPredicted RBP12.52□□□□□ -0.4
SHANK2-214ENST00000468619 HFEQ30201 348 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 HACD4Q5VWC8 232 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 LIPJQ5W064 366 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 SLC22A10Q63ZE4 541 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 ELP2Q6IA86 826 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 COMTD1Q86VU5 262 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 TEX47Q8TBZ9 253 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 ASB11Q8WXH4 323 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 FCRL4Q96PJ5 515 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 ZNF649Q9BS31 505 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 FBXO44Q9H4M3 255 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 A4GNTQ9UNA3 340 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 RCE1Q9Y256 329 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 BACE2Q9Y5Z0 518 aa12.52□□□□□ -0.4
SHANK2-214ENST00000468619 OR6C65A6NJZ3 312 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 LRRN3E7EW58 273 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 NDUFS6O75380 124 aaKnown RBP12.52□□□□□ -0.41
SHANK2-214ENST00000468619 NTN1O95631 604 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 NFATC1O95644 943 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 RLN2P04090 185 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 GDNFP39905 211 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 KCNJ3P48549 501 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 ARF5P84085 180 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 FAM74A1Q5RGS3 127 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 ARL9Q6T311 187 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 ZNF322Q6U7Q0 402 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-214ENST00000468619 THOC6Q86W42 341 aaKnown RBP12.52□□□□□ -0.41
SHANK2-214ENST00000468619 NXPE1Q8N323 547 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 EIF4E3Q8N5X7 224 aaKnown RBP12.52□□□□□ -0.41
SHANK2-214ENST00000468619 BPIFCQ8NFQ6 507 aa12.52□□□□□ -0.41
SHANK2-214ENST00000468619 OR5M9Q8NGP3 310 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms