RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ZNF708P17019 499 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 POU3F2P20265 443 aaPredicted RBP10.44□□□□□ -0.74
CDHR3-205ENST00000468143 ATP6V1C1P21283 382 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 MATN1P21941 496 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 UQCRC1P31930 480 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 SUCLG1P53597 346 aaKnown RBP10.44□□□□□ -0.74
CDHR3-205ENST00000468143 KRTAP10-9P60411 292 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 FOXF2Q12947 444 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 CD226Q15762 336 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 SLC25A35Q3KQZ1 300 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 SPANXN4Q5MJ08 99 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 DCST2Q5T1A1 773 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 AGBL2Q5U5Z8 902 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 NXNQ6DKJ4 435 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 OLIG3Q7RTU3 272 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 DMRTC2Q8IXT2 367 aaPredicted RBP10.44□□□□□ -0.74
CDHR3-205ENST00000468143 KIRREL3Q8IZU9 778 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 ACBD4Q8NC06 268 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 MBD3L2Q8NHZ7 208 aaPredicted RBP10.44□□□□□ -0.74
CDHR3-205ENST00000468143 SMPDL3BQ92485 455 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 ZNF75CPQ92670 426 aaPredicted RBP10.44□□□□□ -0.74
CDHR3-205ENST00000468143 MOAP1Q96BY2 351 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 INTS12Q96CB8 462 aaKnown RBP10.44□□□□□ -0.74
CDHR3-205ENST00000468143 DTNBP1Q96EV8 351 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 MARK4Q96L34 752 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 NPAS1Q99742 590 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 NEUROD4Q9HD90 331 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 UBQLN4Q9NRR5 601 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 DUSP22Q9NRW4 184 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 PCDHGB4Q9UN71 923 aa10.44□□□□□ -0.74
CDHR3-205ENST00000468143 RNF103-CHMP3A0A140T963 221 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 PRSS51A0A1B0GVH4 220 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 TRPC5OSA6NMA1 111 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 RNASET2O00584 256 aaKnown RBP10.43□□□□□ -0.74
CDHR3-205ENST00000468143 TGM6O95932 706 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 TMIGD3P0DMS9 266 aaPredicted RBP10.43□□□□□ -0.74
CDHR3-205ENST00000468143 PEPDP12955 493 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 IGFBP2P18065 325 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 CTSSP25774 331 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 IL12AP29459 219 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 S100A3P33764 101 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 CLDN15P56746 228 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 CLDN20P56880 219 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 OCRLQ01968 901 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 TLE4Q04727 773 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 FAM174BQ3ZCQ3 159 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 SLC9B1Q4ZJI4 515 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 TTMPQ5BVD1 217 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 ANXA8L1Q5VT79 327 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 CHMP1BQ7LBR1 199 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 MAVSQ7Z434 540 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 SPATA19Q7Z5L4 167 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 GCNT2Q8N0V5 402 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 OR8J2Q8NGG1 315 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 RAB3IL1Q8TBN0 382 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 PHOSPHO1Q8TCT1 267 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 SFXN5Q8TD22 340 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 TREX2Q9BQ50 279 aaPredicted RBP10.43□□□□□ -0.74
CDHR3-205ENST00000468143 PIGQQ9BRB3 760 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 SERHL2Q9H4I8 314 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 AIG1Q9NVV5 245 aa10.43□□□□□ -0.74
CDHR3-205ENST00000468143 ZNF629Q9UEG4 869 aaPredicted RBP10.43□□□□□ -0.74
CDHR3-205ENST00000468143 IGLV3-32A0A0A0MS00 114 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 E9PBE3 544 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 SLCO1B7G3V0H7 640 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 OIP5O43482 229 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 HCRTR2O43614 444 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 NGFRP08138 427 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 KRT16P08779 473 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 SSTR2P30874 369 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 MYBPHQ13203 477 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 GANABQ14697 944 aaKnown RBP10.42□□□□□ -0.74
CDHR3-205ENST00000468143 BCL2A1Q16548 175 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 NDUFAF6Q330K2 333 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 FLYWCH1Q4VC44 716 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDHR3-205ENST00000468143 OGFOD2Q6N063 350 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 BHLHB9Q6PI77 547 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 P4HA3Q7Z4N8 544 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 ADGRE4PQ86SQ3 457 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 GRAMD2AQ8IUY3 354 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 LURAP1LQ8IV03 231 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 LRRC34Q8IZ02 419 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 MEIOBQ8N635 442 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 ZNF614Q8N883 585 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 VPS37AQ8NEZ2 397 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 B4GALNT2Q8NHY0 566 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 FIG4Q92562 907 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 RAB8BQ92930 207 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 WNT2BQ93097 391 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 TESCQ96BS2 214 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 SLC35G5Q96KT7 338 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 ATP6V1G3Q96LB4 118 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 LURAP1Q96LR2 239 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 OR52B2Q96RD2 323 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 SDF2Q99470 211 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 TM9SF2Q99805 663 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 INPP5KQ9BT40 448 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 OR51I1Q9H343 314 aa10.42□□□□□ -0.74
CDHR3-205ENST00000468143 CARD8Q9Y2G2 431 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms