RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SENP8Q96LD8 212 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 OR5M11Q96RB7 305 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 OMDQ99983 421 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 ERP44Q9BS26 406 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 ALG12Q9BV10 488 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 RHOJQ9H4E5 214 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 ANAPC7Q9UJX3 599 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 SAMD4AQ9UPU9 718 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 WDR45Q9Y484 360 aa3.36□□□□□ -1.87
CDC42BPA-211ENST00000466538 ATAD2BQ9ULI0 1458 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 MBLAC1A4D2B0 266 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 XPO1O14980 1071 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 GPAA1O43292 621 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 KIAA0754O94854 1291 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 SLC2A10O95528 541 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 IGF1P05019 195 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 UMPSP11172 480 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 TPSB2P20231 275 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 TBXA2RP21731 343 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 MAGEA9P43362 315 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 PPT1P50897 306 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 PLA2G16P53816 162 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 CNTN2Q02246 1040 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 RGS1Q08116 209 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZNF154Q13106 437 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 RUNX3Q13761 415 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 MESDQ14696 234 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 TPSAB1Q15661 275 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 SLC1A5Q15758 541 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 MAPK6Q16659 721 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 Q1RN00 199 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 TIMM50Q3ZCQ8 353 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 SLC22A6Q4U2R8 563 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 LRRC23Q53EV4 343 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 CDC20BQ86Y33 519 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 CSNK1A1LQ8N752 337 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 C15orf54Q8N8G6 183 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 PNPT1Q8TCS8 783 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 TMEM80Q96HE8 168 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 CCT8L2Q96SF2 557 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 PYGO2Q9BRQ0 406 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 TMEM117Q9H0C3 514 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 NT5C3AQ9H0P0 336 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 AIPL1Q9NZN9 384 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 EXTL2Q9UBQ6 330 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 CHRNA9Q9UGM1 479 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 L3MBTL1Q9Y468 752 aa3.35□□□□□ -1.87
CDC42BPA-211ENST00000466538 OR6C65A6NJZ3 312 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 NPIPA7E9PJI5 369 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 H0YCG3 227 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 STX7O15400 261 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZSCAN12O43309 604 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 GMFGO60234 142 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZNF354AO60765 605 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 SPAG6O75602 509 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 CABYRO75952 493 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 NPIPA8P0DM63 369 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 PRG2P13727 222 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 RPA2P15927 270 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 PGCP20142 388 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 IDSP22304 550 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 CA8P35219 290 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 NF2P35240 595 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 MAGEA5P43359 124 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 SLC25A1P53007 311 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 IST1P53990 364 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 RPL8P62917 257 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 CBX1P83916 185 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 SPIBQ01892 262 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 PJVKQ0ZLH3 352 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 DPYSL3Q14195 570 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 SYPL1Q16563 259 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 CFAP157Q5JU67 520 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 FAM120AOSQ5T036 256 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 ATAD3CQ5T2N8 411 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 SLC22A10Q63ZE4 541 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 FAHD2BQ6P2I3 314 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 APTXQ7Z2E3 356 aaKnown RBP3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 SERPINA9Q86WD7 417 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 C9orf40Q8IXQ3 194 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 LYG1Q8N1E2 194 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 IPMKQ8NFU5 416 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 OR9A4Q8NGU2 314 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 FBXO30Q8TB52 745 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 ADAMTS16Q8TE57 1224 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 OSTF1Q92882 214 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 FAHD2AQ96GK7 314 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 C7orf34Q96L11 122 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 CRACR2AQ9BSW2 395 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 TM2D1Q9BX74 207 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 DUSP16Q9BY84 665 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 GLT8D2Q9H1C3 349 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 PPDPFQ9H3Y8 114 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 C6orf203Q9P0P8 240 aaPredicted RBP3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 NPIPA1Q9UND3 350 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 MAB21L2Q9Y586 359 aa3.34□□□□□ -1.87
CDC42BPA-211ENST00000466538 B4DXG7 233 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 GPR89AB7ZAQ6 455 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 E9PLD3 99 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 NUDT21O43809 227 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms