RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PELI2Q9HAT8 420 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 HINT3Q9NQE9 182 aaKnown RBP18.44■□□□□ 0.54
SDF4-205ENST00000465727 TDP1Q9NUW8 608 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 SDHAF2Q9NX18 166 aa18.44■□□□□ 0.54
SDF4-205ENST00000465727 KLF4O43474 513 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 BLVRAP53004 296 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 OR10A3P58181 314 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 TSPAN5P62079 268 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 TRA2BP62995 288 aaKnown RBP18.43■□□□□ 0.54
SDF4-205ENST00000465727 RPL6Q02878 288 aaKnown RBP18.43■□□□□ 0.54
SDF4-205ENST00000465727 FUT5Q11128 374 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 KLF9Q13886 244 aaPredicted RBP18.43■□□□□ 0.54
SDF4-205ENST00000465727 CHMP1BQ7LBR1 199 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 CPOQ8IVL8 374 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 FAM98AQ8NCA5 519 aaKnown RBP18.43■□□□□ 0.54
SDF4-205ENST00000465727 SFXN5Q8TD22 340 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 MS4A3Q96HJ5 214 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 AMDHD1Q96NU7 426 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 AIF1LQ9BQI0 150 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 C20orf85Q9H1P6 137 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 CD93Q9NPY3 652 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 SEMA4GQ9NTN9 838 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 CAMK2AQ9UQM7 478 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 TRABD2BA6NFA1 517 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 SOCS6O14544 535 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 MTRF1O75570 445 aaKnown RBP18.43■□□□□ 0.54
SDF4-205ENST00000465727 SC5DO75845 299 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 MT-ND5P03915 603 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 NDUFV2P19404 249 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 ARFIP1P53367 373 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 DGCR2P98153 550 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 DEFB115Q30KQ5 88 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 ZNF311Q5JNZ3 666 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 C3P1Q6ZMU1 363 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 DPPA4Q7L190 304 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 CEACAM19Q7Z692 300 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 LMNTD1Q8N9Z9 388 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 ZBTB44Q8NCP5 570 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 BEST4Q8NFU0 473 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 TIMP4Q99727 224 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 DPYSL5Q9BPU6 564 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 NDC1Q9BTX1 674 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 GLIPR2Q9H4G4 154 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 ZNF334Q9HCZ1 680 aaPredicted RBP18.43■□□□□ 0.54
SDF4-205ENST00000465727 NLGN3Q9NZ94 848 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 RPS6KB2Q9UBS0 482 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 SCML1Q9UN30 329 aa18.43■□□□□ 0.54
SDF4-205ENST00000465727 PPIEQ9UNP9 301 aaKnown RBP18.43■□□□□ 0.54
SDF4-205ENST00000465727 RAB3BP20337 219 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 XPAP23025 273 aaPredicted RBP18.42■□□□□ 0.54
SDF4-205ENST00000465727 TLE2Q04725 743 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 METTL11BQ5VVY1 283 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 FAM198BQ6UWH4 519 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 MEPCEQ7L2J0 689 aaKnown RBP18.42■□□□□ 0.54
SDF4-205ENST00000465727 NRSN1Q8IZ57 195 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 CMTM8Q8IZV2 173 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 SLC44A3Q8N4M1 653 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 FAM71CQ8NEG0 241 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 ABHD4Q8TB40 342 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 ST8SIA4Q92187 359 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 DPEP2Q9H4A9 486 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 IL21Q9HBE4 155 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 KRCC1Q9NPI7 259 aaPredicted RBP18.42■□□□□ 0.54
SDF4-205ENST00000465727 AKAP7Q9P0M2 348 aaPredicted RBP18.42■□□□□ 0.54
SDF4-205ENST00000465727 CHST2Q9Y4C5 530 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 KIAA1549LQ6ZVL6 1849 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 DAPL1A0PJW8 107 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 CPSF4LA6NMK7 179 aaKnown RBP18.42■□□□□ 0.54
SDF4-205ENST00000465727 TMPRSS11DO60235 418 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 STX11O75558 287 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 WDPCPO95876 746 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 CKMP06732 381 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 SELENOPP49908 381 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 SLC7A9P82251 487 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 TCTE1Q5JU00 501 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 PIP5KL1Q5T9C9 394 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 NIPAL3Q6P499 406 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 ARL9Q6T311 187 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 MBOAT2Q6ZWT7 520 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 C17orf64Q86WR6 236 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 BMPERQ8N8U9 685 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 SMIM4Q8WVI0 70 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 RGMAQ96B86 450 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 MOAP1Q96BY2 351 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 LHX9Q9NQ69 397 aa18.42■□□□□ 0.54
SDF4-205ENST00000465727 TEX10Q9NXF1 929 aaPredicted RBP18.42■□□□□ 0.54
SDF4-205ENST00000465727 COL4A6Q14031 1691 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 A0A1B0GUH1 482 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 LILRB5O75023 590 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 MT-ND4P03905 459 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 TIMP2P16035 220 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 NTSP30990 170 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 GCGRP47871 477 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 DBPQ10586 325 aaPredicted RBP18.41■□□□□ 0.54
SDF4-205ENST00000465727 BTN1A1Q13410 526 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 TRMT11Q7Z4G4 463 aaKnown RBP18.41■□□□□ 0.54
SDF4-205ENST00000465727 ANKRD53Q8N9V6 530 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 SLC43A3Q8NBI5 491 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 RAD51AP1Q96B01 352 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 ART5Q96L15 291 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms