RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 UBE2R2Q712K3 238 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 ZER1Q7Z7L7 766 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 LHFPL3Q86UP9 236 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CPXM2Q8N436 756 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 HORMAD2Q8N7B1 307 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 FAM98AQ8NCA5 519 aaKnown RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 FBXO15Q8NCQ5 510 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 ASB11Q8WXH4 323 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 THAP4Q8WY91 577 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 OR2A7Q96R45 310 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 RNF208Q9H0X6 261 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 IL26Q9NPH9 171 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 NANSQ9NR45 359 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CA10Q9NS85 328 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 DNAJC11Q9NVH1 559 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 MARK1Q9P0L2 795 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 NDRG3Q9UGV2 375 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CD84Q9UIB8 345 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 EXOGQ9Y2C4 368 aaKnown RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 AGAP14A8MT82 685 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 H0YIV9 168 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 J3QRE1 110 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 ST8SIA5O15466 376 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 GSTZ1O43708 216 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 FZD7O75084 574 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 RGS9O75916 674 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 TFP02787 698 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 MT-ND4P03905 459 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CD3GP09693 182 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 GABRA1P14867 456 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 NDUFV2P19404 249 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 MST1P26927 711 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CCR7P32248 378 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CD96P40200 585 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 KCNJ5P48544 419 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 MEOX2P50222 304 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 HTRA3P83110 453 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 DYRK1AQ13627 763 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 DOC2AQ14183 400 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 AARDQ4LEZ3 155 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 ATP13A5Q4VNC0 1218 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 RPS26P11Q5JNZ5 115 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 FAM209BQ5JX69 171 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 MPP7Q5T2T1 576 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 REEP3Q6NUK4 255 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 FUT10Q6P4F1 479 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 OLIG3Q7RTU3 272 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 TRMT11Q7Z4G4 463 aaKnown RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 C2orf73Q8N5S3 287 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 ZNF454Q8N9F8 522 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 FAM71CQ8NEG0 241 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 OR52N1Q8NH53 320 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 WDR89Q96FK6 387 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 LRRC46Q96FV0 321 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 TEFMQ96QE5 360 aaKnown RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 TIMP4Q99727 224 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 GPR62Q9BZJ7 368 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 MAN2C1Q9NTJ4 1040 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 GULP1Q9UBP9 304 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 A4GNTQ9UNA3 340 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 ENTPD4Q9Y227 616 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 GFYI3L273 518 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 L7N2F9 121 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 RNF13O43567 381 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 PIP5K1CO60331 668 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 GREM1O60565 184 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 GPR37L1O60883 481 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 ABLIM3O94929 683 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CLDN7O95471 211 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 APOC1P02654 83 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 APOC3P02656 99 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 EPHX1P07099 455 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 RHOCP08134 193 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 SRPRAP08240 638 aaKnown RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 GIPP09681 153 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 CPN1P15169 458 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 PTGER1P34995 402 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CSKP41240 450 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CSNK1DP48730 415 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 LSM11P83369 360 aaKnown RBP eCLIP6.06□□□□□ -1.44
SIK3-207ENST00000465421 UBXN2BQ14CS0 331 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 ZNF528Q3MIS6 628 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 LYPLAL1Q5VWZ2 237 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 RNF219Q5W0B1 726 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 C1orf94Q6P1W5 598 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 SFXN4Q6P4A7 337 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 PODNL1Q6PEZ8 512 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 DEF8Q6ZN54 512 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 RFLNAQ6ZTI6 216 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 MORN4Q8NDC4 146 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 OR5M9Q8NGP3 310 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 NSMAFQ92636 917 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 FAIM2Q9BWQ8 316 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 KLF16Q9BXK1 252 aaPredicted RBP6.06□□□□□ -1.44
SIK3-207ENST00000465421 REEP4Q9H6H4 257 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 TRPV4Q9HBA0 871 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 NKIRAS2Q9NYR9 191 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 ACTR10Q9NZ32 417 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CFAP97Q9P2B7 532 aa6.06□□□□□ -1.44
SIK3-207ENST00000465421 CTSFQ9UBX1 484 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms