RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SSTR2P30874 369 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 NTSP30990 170 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 RAB8AP61006 207 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 RPS7P62081 194 aaKnown RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 RAB33AQ14088 237 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ZNF311Q5JNZ3 666 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 FAM69AQ5T7M9 428 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 MBOAT2Q6ZWT7 520 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 NLRC3Q7RTR2 1065 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 OVCH2Q7RTZ1 564 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 C17orf64Q86WR6 236 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 TCEAL8Q8IYN2 117 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ZNF687Q8N1G0 1237 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ANKRD53Q8N9V6 530 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 LMNTD1Q8N9Z9 388 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 FAM98AQ8NCA5 519 aaKnown RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 FAM71CQ8NEG0 241 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 OR2T35Q8NGX2 323 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 OR5W2Q8NH69 310 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 BRIX1Q8TDN6 353 aaKnown RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 RGMAQ96B86 450 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 IGSF21Q96ID5 467 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CMTM3Q96MX0 182 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 MFRPQ9BY79 579 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 REG4Q9BYZ8 158 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 LINC00597Q9H2U6 94 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ISG20L2Q9H9L3 353 aaKnown RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 HMX1Q9NP08 348 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 CTPS2Q9NRF8 586 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 TEX10Q9NXF1 929 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 RDH8Q9NYR8 311 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CALML5Q9NZT1 146 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 C5AR2Q9P296 337 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 GLS2Q9UI32 602 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SLC13A4Q9UKG4 626 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CAMK2AQ9UQM7 478 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 A0A0A6YYD5 115 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 TRAV1-2A0A0B4J238 106 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 OR6C65A6NJZ3 312 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ZNF749O43361 778 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 PEX14O75381 377 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 LEFTY1O75610 366 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CH25HO95992 272 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SOD2P04179 222 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 IFNA16P05015 189 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CD3GP09693 182 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 TYRP1P17643 537 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 PAICSP22234 425 aaKnown RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 XPAP23025 273 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 PRKAR1BP31321 381 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 BLVRAP53004 296 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 OR10A3P58181 314 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 VSX2P58304 361 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 TAS2R38P59533 333 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 DGCR2P98153 550 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 MLLT1Q03111 559 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 TLE2Q04725 743 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CRYZQ08257 329 aaKnown RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 OPCMLQ14982 345 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ARHGAP19Q14CB8 494 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 NHLRC3Q5JS37 347 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ELFN2Q5R3F8 820 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 TMEM81Q6P7N7 255 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ARSKQ6UWY0 536 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 LIPIQ6XZB0 460 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 MEPCEQ7L2J0 689 aaKnown RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 OLIG3Q7RTU3 272 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SZRD1Q7Z422 152 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CEACAM19Q7Z692 300 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 KIAA0907Q7Z7F0 614 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 RNF180Q86T96 592 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 CPOQ8IVL8 374 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 FTMTQ8N4E7 242 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SLC44A3Q8N4M1 653 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 TMEM99Q8N816 258 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SLC43A3Q8NBI5 491 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 OR56A1Q8NGH5 318 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 OR51G2Q8NGK0 314 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 OR51Q1Q8NH59 317 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ABHD4Q8TB40 342 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SMIM4Q8WVI0 70 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 RAD51AP1Q96B01 352 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ZNF514Q96K75 400 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 KLHL15Q96M94 604 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 COQ10AQ96MF6 247 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 RBCK1Q9BYM8 510 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ZDHHC5Q9C0B5 715 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SPRTNQ9H040 489 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 C20orf85Q9H1P6 137 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 ZCCHC4Q9H5U6 513 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 PLEKHA1Q9HB21 404 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 KRCC1Q9NPI7 259 aaPredicted RBP6.81□□□□□ -1.32
USP48-206ENST00000464577 SLC35C2Q9NQQ7 365 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 STARD7Q9NQZ5 370 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 NANSQ9NR45 359 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 COQ3Q9NZJ6 369 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 RPS6KB2Q9UBS0 482 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 MAFFQ9ULX9 164 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 KCNMB2Q9Y691 235 aa6.81□□□□□ -1.32
USP48-206ENST00000464577 SESN1Q9Y6P5 492 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms