RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 NEURL2Q9BR09 285 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 EVA1AQ9H8M9 152 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 CLDN16Q9Y5I7 305 aa20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 ARID1BQ8NFD5 2236 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-216ENST00000464275 CENPVL1A0A0U1RR11 272 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 BOLA2-SMG1P6H3BVE0 249 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 CDC123O75794 336 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 TNNI3P19429 210 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 CD1CP29017 333 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 ARRB1P49407 418 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 EMDP50402 254 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 HOXC5Q00444 222 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 IRF3Q14653 427 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 LYSMD4Q5XG99 296 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 TSSK4Q6SA08 328 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 PRICKLE2Q7Z3G6 844 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 GDF7Q7Z4P5 450 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 METTL27Q8N6F8 245 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 ACOT11Q8WXI4 607 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 PELOQ9BRX2 385 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 ARMC7Q9H6L4 198 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 AMBNQ9NP70 447 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 CUTCQ9NTM9 273 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 M0R082 166 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 KCNK2O95069 426 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 GALNSP34059 522 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 LIPAP38571 399 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 ZNF136P52737 540 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 SRSF5Q13243 272 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 KCNAB1Q14722 419 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 TIMM50Q3ZCQ8 353 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 AMZ1Q400G9 498 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 PLEKHG7Q6ZR37 379 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 PIGXQ8TBF5 258 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 Q96MT0 163 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 GPA33Q99795 319 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 NXF2Q9GZY0 626 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 SEMA5BQ9P283 1151 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 MUTYHQ9UIF7 546 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 KCNE5Q9UJ90 142 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 NTNG1Q9Y2I2 539 aa20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 TMEM184BQ9Y519 407 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-216ENST00000464275 MN1Q10571 1320 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 CACNA1EQ15878 2313 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 H3BMH7 237 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 PEX12O00623 359 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 CNOT3O75175 753 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 OR2B3O76000 313 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 GNSP15586 552 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 TGM1P22735 817 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 DHPSP49366 369 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 SEPHS1P49903 392 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 RPS3AP61247 264 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 LSM11P83369 360 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 PSG6Q00889 435 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 CFHR1Q03591 330 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 TSPAN31Q12999 210 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 SERTAD2Q14140 314 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 SHBQ15464 509 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 TMEM201Q5SNT2 666 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 MRPL2Q5T653 305 aaKnown RBP20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 BTLAQ7Z6A9 289 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 CDCA4Q9BXL8 241 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 GPR83Q9NYM4 423 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 UGT2A1Q9Y4X1 527 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 DNAH14Q0VDD8 3507 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 RP1P56715 2156 aa20.16■□□□□ 0.82
PDLIM2-216ENST00000464275 NPIPA5A0A0B4J1W7 369 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 METTL15A6NJ78 407 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 TMEM150CB9EJG8 249 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 NPIPA7E9PJI5 369 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 PRAMEF2O60811 474 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 NPIPA8P0DM63 369 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 PIPP12273 146 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 SSTR4P31391 388 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 BNC1Q01954 994 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 ZNF267Q14586 743 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 AGAP7PQ5VUJ5 663 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 NKAIN4Q8IVV8 208 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 Q8N9G6 341 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 B3GNT7Q8NFL0 401 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 OR8J1Q8NGP2 316 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 MVB12AQ96EY5 273 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 RACGAP1Q9H0H5 632 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 SP140LQ9H930 580 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 CAPN10Q9HC96 672 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 COL5A1P20908 1838 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 ASXL3Q9C0F0 2248 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 CDHR4A6H8M9 788 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 THY1P04216 161 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 STSP08842 583 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 MAOAP21397 527 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 C21orf33P30042 268 aaPredicted RBP20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 OMPP47874 163 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 CDK5Q00535 292 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 ZNF181Q2M3W8 571 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 WDR5BQ86VZ2 330 aa20.15■□□□□ 0.82
PDLIM2-216ENST00000464275 D2HGDHQ8N465 521 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms