RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ZNF749O43361 778 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 N4BP1O75113 896 aaKnown RBP4.81□□□□□ -1.64
COPS3-205ENST00000463097 TSPAN12O95859 305 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 JCHAINP01591 159 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 HBQ1P09105 142 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 SNHG28P0DPA3 235 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 BCKDHAP12694 445 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 POU2F1P14859 743 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 GNB3P16520 340 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 TNNT2P45379 298 aaPredicted RBP4.81□□□□□ -1.64
COPS3-205ENST00000463097 NOVA1P51513 510 aaKnown RBP4.81□□□□□ -1.64
COPS3-205ENST00000463097 DLX5P56178 289 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 RPS6P62753 249 aaKnown RBP4.81□□□□□ -1.64
COPS3-205ENST00000463097 TMEM52BQ4KMG9 183 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 ACSM5Q6NUN0 579 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 APOOLQ6UXV4 268 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 KDM7AQ6ZMT4 941 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 KIF6Q6ZMV9 814 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 NUFIP2Q7Z417 695 aaKnown RBP4.81□□□□□ -1.64
COPS3-205ENST00000463097 MOB3BQ86TA1 216 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 SERINC5Q86VE9 423 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 ECHDC2Q86YB7 292 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 ZSCAN4Q8NAM6 433 aaPredicted RBP4.81□□□□□ -1.64
COPS3-205ENST00000463097 NUP37Q8NFH4 326 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 TMEM190Q8WZ59 177 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 NTNG2Q96CW9 530 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 SDSLQ96GA7 329 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 TUBGCP2Q9BSJ2 902 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 NUP58Q9BVL2 599 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 RBM4Q9BWF3 364 aaKnown RBP4.81□□□□□ -1.64
COPS3-205ENST00000463097 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 LRRN3Q9H3W5 708 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 RNF41Q9H4P4 317 aaPredicted RBP4.81□□□□□ -1.64
COPS3-205ENST00000463097 ELL3Q9HB65 397 aaPredicted RBP4.81□□□□□ -1.64
COPS3-205ENST00000463097 ADGRL4Q9HBW9 690 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 HMGXB3Q12766 1538 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 CAMSAP2Q08AD1 1489 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 SNAPC4Q5SXM2 1469 aa4.81□□□□□ -1.64
COPS3-205ENST00000463097 METP08581 1390 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 USP47Q96K76 1375 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 FRMPD4Q14CM0 1322 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 A0A1B0GVL5 298 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 HEATR9A2RTY3 570 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 C11orf98E9PRG8 122 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 TRAFD1O14545 582 aaPredicted RBP4.8□□□□□ -1.64
COPS3-205ENST00000463097 TYROBPO43914 113 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 SRPX2O60687 465 aaPredicted RBP4.8□□□□□ -1.64
COPS3-205ENST00000463097 LRATO95237 230 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 NUDT14O95848 222 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 PGK1P00558 417 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 F10P00742 488 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 SP1P08047 785 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 FCGR3AP08637 254 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 ALPIP09923 528 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 H2BFMP0C1H6 154 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 HSMCR30P0CW71 290 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 ANXA8P13928 327 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 CCDC130P13994 396 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 P2RY1P47900 373 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 POU3F4P49335 361 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 BDH1Q02338 343 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 DMTNQ08495 405 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 SFT2D3Q587I9 215 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 PDZK1Q5T2W1 519 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 STPG1Q5TH74 334 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 ANXA8L1Q5VT79 327 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 CARM1Q86X55 608 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 PHC2Q8IXK0 858 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 CLEC4FQ8N1N0 589 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 Q8N9G6 341 aaPredicted RBP4.8□□□□□ -1.64
COPS3-205ENST00000463097 BBOF1Q8ND07 529 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 OR1B1Q8NGR6 318 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 ZNF519Q8TB69 540 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.8□□□□□ -1.64
COPS3-205ENST00000463097 NABP1Q96AH0 204 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 ZBTB9Q96C00 473 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 C11orf24Q96F05 449 aaPredicted RBP4.8□□□□□ -1.64
COPS3-205ENST00000463097 PARD6BQ9BYG5 372 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 LIME1Q9H400 295 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 EXO5Q9H790 373 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 POLE4Q9NR33 117 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 ZDHHC18Q9NUE0 388 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 ZNF639Q9UID6 485 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 PSME2Q9UL46 239 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 POLDIP2Q9Y2S7 368 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 PYGO1Q9Y3Y4 419 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 CLASP1Q7Z460 1538 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 ARHGEF12Q9NZN5 1544 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 RALGAPBQ86X10 1494 aa4.8□□□□□ -1.64
COPS3-205ENST00000463097 SUPT6HQ7KZ85 1726 aaKnown RBP4.8□□□□□ -1.64
COPS3-205ENST00000463097 KDM5CP41229 1560 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 LRP5LA4QPB2 252 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 BTBD17A6NE02 478 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 BOLA2-SMG1P6H3BVE0 249 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 MSH4O15457 936 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 RAMP1O60894 148 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 IGFBP1P08833 259 aaPredicted RBP4.79□□□□□ -1.64
COPS3-205ENST00000463097 PATE4P0C8F1 98 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 PABPC4LP0CB38 370 aaKnown RBP4.79□□□□□ -1.64
COPS3-205ENST00000463097 CYP2B6P20813 491 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms