RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 BEST3Q8N1M1 668 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 KDF1Q8NAX2 398 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-202ENST00000463060 SMYD1Q8NB12 490 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 POGLUT1Q8NBL1 392 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 OR10G3Q8NGC4 313 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 GRHL3Q8TE85 626 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 PAQR8Q8TEZ7 354 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 CANT1Q8WVQ1 401 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 RASSF5Q8WWW0 418 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 ASB15Q8WXK1 588 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 C7orf34Q96L11 122 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 LRGUKQ96M69 825 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 DCBLD2Q96PD2 775 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 SECISBP2Q96T21 854 aaKnown RBP13.16□□□□□ -0.3
COL6A1-202ENST00000463060 WFDC6Q9BQY6 131 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 PINK1Q9BXM7 581 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 CPNE5Q9HCH3 593 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 CCM2LQ9NUG4 571 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-202ENST00000463060 ADPRHL2Q9NX46 363 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 SEC14L3Q9UDX4 400 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 TEKT2Q9UIF3 430 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF232Q9UNY5 417 aa13.16□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF443Q9Y2A4 671 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-202ENST00000463060 RRP15Q9Y3B9 282 aaKnown RBP13.16□□□□□ -0.3
COL6A1-202ENST00000463060 CDHR4A6H8M9 788 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 TMEM8BA6NDV4 472 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 SERINC4A6NH21 518 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 SYT5O00445 386 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 BCAS1O75363 584 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-202ENST00000463060 STAMBPO95630 424 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 GPIP06744 558 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 IL7RP16871 459 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 CD96P40200 585 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 CCL11P51671 97 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 UCNP55089 124 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 MFAP5Q13361 173 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 NRF1Q16656 503 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 LIN52Q52LA3 116 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 ABHD17BQ5VST6 288 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 AGAP7PQ5VUJ5 663 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 BROXQ5VW32 411 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 ISLR2Q6UXK2 745 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 LRRC69Q6ZNQ3 347 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 SPATA24Q86W54 205 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 FAM71CQ8NEG0 241 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 FDCSPQ8NFU4 85 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 OR4D11Q8NGI4 311 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 SLC26A7Q8TE54 656 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 HSH2DQ96JZ2 352 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 FRMD6Q96NE9 622 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 AGAP4Q96P64 663 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 RNF32Q9H0A6 362 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 MAGIXQ9H6Y5 334 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 PROK2Q9HC23 129 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-202ENST00000463060 RLIMQ9NVW2 624 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 CNOT11Q9UKZ1 510 aaKnown RBP13.15□□□□□ -0.3
COL6A1-202ENST00000463060 BAG5Q9UL15 447 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 ABCG2Q9UNQ0 655 aa13.15□□□□□ -0.3
COL6A1-202ENST00000463060 LOC400499M0QZD8 3231 aa13.15□□□□□ -0.31
COL6A1-202ENST00000463060 DHRS12A0PJE2 317 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 ANKRD33BA6NCL7 494 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 A6NL46 340 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 H3BNX3 289 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 HS6ST1O60243 411 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 ZNF682O95780 498 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 SLC7A1P30825 629 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 CASP3P42574 277 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 MAGEA2P43356 314 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 ERFP50548 548 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 TUBA3CQ13748 450 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 LARS2Q15031 903 aaKnown RBP13.14□□□□□ -0.31
COL6A1-202ENST00000463060 CD226Q15762 336 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 ZSWIM7Q19AV6 140 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 MRPL2Q5T653 305 aaKnown RBP13.14□□□□□ -0.31
COL6A1-202ENST00000463060 IRAK1BP1Q5VVH5 260 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 TUBA3EQ6PEY2 450 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 MDGA2Q7Z553 956 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 CMIPQ8IY22 773 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 TMEM156Q8N614 296 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 ZNF527Q8NB42 609 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 ZCCHC14Q8WYQ9 949 aaKnown RBP13.14□□□□□ -0.31
COL6A1-202ENST00000463060 LZICQ8WZA0 190 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 CNOT9Q92600 299 aaKnown RBP13.14□□□□□ -0.31
COL6A1-202ENST00000463060 HAS2Q92819 552 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 TMCO6Q96DC7 493 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 TPD52L3Q96J77 140 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 SGCZQ96LD1 299 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 SMAD5Q99717 465 aaKnown RBP13.14□□□□□ -0.31
COL6A1-202ENST00000463060 ARHGDIGQ99819 225 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 UGT2B28Q9BY64 529 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 ARMC1Q9NVT9 282 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 GPR83Q9NYM4 423 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 ANAPC2Q9UJX6 822 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 CHD8Q9HCK8 2581 aa13.14□□□□□ -0.31
COL6A1-202ENST00000463060 CACNA1BQ00975 2339 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 PTPRQQ9UMZ3 2332 aa13.13□□□□□ -0.31
COL6A1-202ENST00000463060 ANKRD11Q6UB99 2663 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms