RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 STACQ99469 402 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 TM9SF2Q99805 663 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 PAIP2Q9BPZ3 127 aaKnown RBP9.2□□□□□ -0.94
SF3A3-204ENST00000462258 PIGQQ9BRB3 760 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 DUSP26Q9BV47 211 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 SFXN3Q9BWM7 321 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 C20orf27Q9GZN8 174 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 ACBD3Q9H3P7 528 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 AKTIPQ9H8T0 292 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 DUSP22Q9NRW4 184 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 HAO1Q9UJM8 370 aa9.2□□□□□ -0.94
SF3A3-204ENST00000462258 NUP214P35658 2090 aaPredicted RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 SYT5O00445 386 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 SCDO00767 359 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 CFLARO15519 480 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 NDUFB5O43674 189 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 ERLIN1O75477 346 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 RCBTB2O95199 551 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 IL18BPO95998 194 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 HPGDP15428 266 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 ZNF17P17021 662 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 CAPN3P20807 821 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 TBXA2RP21731 343 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 LCN1P31025 176 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 KIR2DL3P43628 341 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 CCT3P49368 545 aaKnown RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 RPL14P50914 215 aaKnown RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 CLDN8P56748 225 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 BST1Q10588 318 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 FOXF2Q12947 444 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 BCL2A1Q16548 175 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 LSM12Q3MHD2 195 aaKnown RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 FLYWCH1Q4VC44 716 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 HHATQ5VTY9 493 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 CDC73Q6P1J9 531 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 P4HA3Q7Z4N8 544 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 OR5AK3PQ8NH89 298 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 GOT1L1Q8NHS2 421 aaPredicted RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 FAM110BQ8TC76 370 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 SMPDL3BQ92485 455 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 WNT2BQ93097 391 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 INTS12Q96CB8 462 aaKnown RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 COQ8BQ96D53 544 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 BTBD2Q9BX70 525 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 ACTRT3Q9BYD9 372 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 NUF2Q9BZD4 464 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 PIGUQ9H490 435 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 HHATLQ9HCP6 504 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 GPATCH2Q9NW75 528 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 FBXO34Q9NWN3 711 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 FOXD3Q9UJU5 478 aaPredicted RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 FAF1Q9UNN5 650 aaPredicted RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 VDAC3Q9Y277 283 aa9.19□□□□□ -0.94
SF3A3-204ENST00000462258 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 HRNRQ86YZ3 2850 aaPredicted RBP9.19□□□□□ -0.94
SF3A3-204ENST00000462258 RNF103-CHMP3A0A140T963 221 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 A0A1W2PQD3 144 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 TMEM120BA0PK00 339 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 SLC22A20A6NK97 555 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 SHISA8B8ZZ34 492 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 H0YC42 278 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 LINC01387J3KSC0 135 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 TGM6O95932 706 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 ATP6V1C1P21283 382 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 CPA2P48052 419 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 TPD52P55327 224 aaPredicted RBP9.18□□□□□ -0.94
SF3A3-204ENST00000462258 EEFSECP57772 596 aaKnown RBP9.18□□□□□ -0.94
SF3A3-204ENST00000462258 HBA1P69905 142 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 SORDQ00796 357 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 STX3Q13277 289 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 CD226Q15762 336 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 PGS1Q32NB8 556 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 GLYR1Q49A26 553 aaPredicted RBP9.18□□□□□ -0.94
SF3A3-204ENST00000462258 DCST2Q5T1A1 773 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 OR4F3Q6IEY1 312 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 CHMP1BQ7LBR1 199 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 LUZP2Q86TE4 346 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 MISPQ8IVT2 679 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 LRRC34Q8IZ02 419 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 CLECL1Q8IZS7 167 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 OR4C3Q8NH37 302 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 MGARPQ8TDB4 240 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 ADAMTS15Q8TE58 950 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 SH3YL1Q96HL8 342 aaPredicted RBP9.18□□□□□ -0.94
SF3A3-204ENST00000462258 SLC35G5Q96KT7 338 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 DPY30Q9C005 99 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 UBQLN4Q9NRR5 601 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 GIN1Q9NXP7 522 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 CRIM1Q9NZV1 1036 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 JKAMPQ9P055 326 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 PACSIN3Q9UKS6 424 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 ZNF337Q9Y3M9 751 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 CELSR1Q9NYQ6 3014 aa9.18□□□□□ -0.94
SF3A3-204ENST00000462258 A0A087WZY1 265 aa9.17□□□□□ -0.94
SF3A3-204ENST00000462258 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.17□□□□□ -0.94
SF3A3-204ENST00000462258 NPIPA5A0A0B4J1W7 369 aa9.17□□□□□ -0.94
SF3A3-204ENST00000462258 A0A1W2PNV4 684 aa9.17□□□□□ -0.94
SF3A3-204ENST00000462258 NPIPA7E9PJI5 369 aa9.17□□□□□ -0.94
SF3A3-204ENST00000462258 RNASET2O00584 256 aaKnown RBP9.17□□□□□ -0.94
SF3A3-204ENST00000462258 TNFSF13O75888 250 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms