RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 FICDQ9BVA6 458 aa2.56□□□□□ -2
RFC4-211ENST00000460408 HCAR1Q9BXC0 346 aa2.56□□□□□ -2
RFC4-211ENST00000460408 LIN28AQ9H9Z2 209 aaKnown RBP2.56□□□□□ -2
RFC4-211ENST00000460408 CUTCQ9NTM9 273 aa2.56□□□□□ -2
RFC4-211ENST00000460408 AGPAT5Q9NUQ2 364 aa2.56□□□□□ -2
RFC4-211ENST00000460408 ATP6V1HQ9UI12 483 aa2.56□□□□□ -2
RFC4-211ENST00000460408 ZNF107Q9UII5 783 aaPredicted RBP2.56□□□□□ -2
RFC4-211ENST00000460408 BARX2Q9UMQ3 279 aaPredicted RBP2.56□□□□□ -2
RFC4-211ENST00000460408 B9D1Q9UPM9 204 aa2.56□□□□□ -2
RFC4-211ENST00000460408 CLIP1P30622 1438 aa2.56□□□□□ -2
RFC4-211ENST00000460408 NUP153P49790 1475 aaKnown RBP2.56□□□□□ -2
RFC4-211ENST00000460408 FYCO1Q9BQS8 1478 aa2.56□□□□□ -2
RFC4-211ENST00000460408 SLIT1O75093 1534 aa2.56□□□□□ -2
RFC4-211ENST00000460408 GLI3P10071 1580 aa2.56□□□□□ -2
RFC4-211ENST00000460408 KIDINS220Q9ULH0 1771 aa2.56□□□□□ -2
RFC4-211ENST00000460408 A0A087WZY1 265 aa2.55□□□□□ -2
RFC4-211ENST00000460408 IGHV3-35A0A0C4DH35 117 aa2.55□□□□□ -2
RFC4-211ENST00000460408 CCT8L1PA6NM43 557 aa2.55□□□□□ -2
RFC4-211ENST00000460408 WASH3PC4AMC7 463 aa2.55□□□□□ -2
RFC4-211ENST00000460408 K7EPI3 171 aa2.55□□□□□ -2
RFC4-211ENST00000460408 SLC17A2O00624 439 aa2.55□□□□□ -2
RFC4-211ENST00000460408 SDHDO14521 159 aa2.55□□□□□ -2
RFC4-211ENST00000460408 CLDN3O15551 220 aa2.55□□□□□ -2
RFC4-211ENST00000460408 LCMT2O60294 686 aaKnown RBP2.55□□□□□ -2
RFC4-211ENST00000460408 PLXNC1O60486 1568 aa2.55□□□□□ -2
RFC4-211ENST00000460408 SCGB2A1O75556 95 aa2.55□□□□□ -2
RFC4-211ENST00000460408 PRAMEF12O95522 483 aa2.55□□□□□ -2
RFC4-211ENST00000460408 DIRAS3O95661 229 aa2.55□□□□□ -2
RFC4-211ENST00000460408 AK1P00568 194 aa2.55□□□□□ -2
RFC4-211ENST00000460408 JCHAINP01591 159 aa2.55□□□□□ -2
RFC4-211ENST00000460408 CHRNA1P02708 482 aa2.55□□□□□ -2
RFC4-211ENST00000460408 GIG44P09565 113 aaPredicted RBP2.55□□□□□ -2
RFC4-211ENST00000460408 THRBP10828 461 aa2.55□□□□□ -2
RFC4-211ENST00000460408 IDSP22304 550 aa2.55□□□□□ -2
RFC4-211ENST00000460408 FASP25445 335 aa2.55□□□□□ -2
RFC4-211ENST00000460408 CYLC1P35663 651 aaPredicted RBP2.55□□□□□ -2
RFC4-211ENST00000460408 MDH1P40925 334 aaKnown RBP2.55□□□□□ -2
RFC4-211ENST00000460408 PTGFRP43088 359 aa2.55□□□□□ -2
RFC4-211ENST00000460408 METAP1P53582 386 aa2.55□□□□□ -2
RFC4-211ENST00000460408 MTTPP55157 894 aa2.55□□□□□ -2
RFC4-211ENST00000460408 ERVPABLB-1P60509 514 aa2.55□□□□□ -2
RFC4-211ENST00000460408 PRKCEQ02156 737 aa2.55□□□□□ -2
RFC4-211ENST00000460408 SLC10A1Q14973 349 aa2.55□□□□□ -2
RFC4-211ENST00000460408 UBE2V2Q15819 145 aa2.55□□□□□ -2
RFC4-211ENST00000460408 TIMM50Q3ZCQ8 353 aa2.55□□□□□ -2
RFC4-211ENST00000460408 TTC31Q49AM3 519 aaPredicted RBP2.55□□□□□ -2
RFC4-211ENST00000460408 TMEM52BQ4KMG9 183 aa2.55□□□□□ -2
RFC4-211ENST00000460408 LINC01620Q4KN68 170 aa2.55□□□□□ -2
RFC4-211ENST00000460408 SLC25A30Q5SVS4 291 aa2.55□□□□□ -2
RFC4-211ENST00000460408 UTF1Q5T230 341 aa2.55□□□□□ -2
RFC4-211ENST00000460408 NIPAL3Q6P499 406 aa2.55□□□□□ -2
RFC4-211ENST00000460408 PAMR1Q6UXH9 720 aa2.55□□□□□ -2
RFC4-211ENST00000460408 BAIAP2L2Q6UXY1 529 aa2.55□□□□□ -2
RFC4-211ENST00000460408 WASH2PQ6VEQ5 465 aa2.55□□□□□ -2
RFC4-211ENST00000460408 Q7L0L9 218 aa2.55□□□□□ -2
RFC4-211ENST00000460408 ERASQ7Z444 233 aa2.55□□□□□ -2
RFC4-211ENST00000460408 EFCAB13Q8IY85 973 aa2.55□□□□□ -2
RFC4-211ENST00000460408 GCNT2Q8N0V5 402 aa2.55□□□□□ -2
RFC4-211ENST00000460408 SPAG16Q8N0X2 631 aa2.55□□□□□ -2
RFC4-211ENST00000460408 LINC00612Q8N6U2 182 aa2.55□□□□□ -2
RFC4-211ENST00000460408 ZBTB44Q8NCP5 570 aa2.55□□□□□ -2
RFC4-211ENST00000460408 KLHL30-AS1Q8NEE0 82 aa2.55□□□□□ -2
RFC4-211ENST00000460408 OR5AU1Q8NGC0 362 aa2.55□□□□□ -2
RFC4-211ENST00000460408 VN1R17PQ8TDU5 208 aa2.55□□□□□ -2
RFC4-211ENST00000460408 TAF4BQ92750 862 aa2.55□□□□□ -2
RFC4-211ENST00000460408 CCDC7Q96M83 1385 aa2.55□□□□□ -2
RFC4-211ENST00000460408 OPN3Q9H1Y3 402 aaPredicted RBP2.55□□□□□ -2
RFC4-211ENST00000460408 LPAR2Q9HBW0 351 aa2.55□□□□□ -2
RFC4-211ENST00000460408 TIGARQ9NQ88 270 aa2.55□□□□□ -2
RFC4-211ENST00000460408 POLE3Q9NRF9 147 aa2.55□□□□□ -2
RFC4-211ENST00000460408 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.55□□□□□ -2
RFC4-211ENST00000460408 GPATCH8Q9UKJ3 1502 aaKnown RBP2.55□□□□□ -2
RFC4-211ENST00000460408 DUSP12Q9UNI6 340 aa2.55□□□□□ -2
RFC4-211ENST00000460408 AURKCQ9UQB9 309 aa2.55□□□□□ -2
RFC4-211ENST00000460408 EIF3LQ9Y262 564 aaKnown RBP2.55□□□□□ -2
RFC4-211ENST00000460408 MAST1Q9Y2H9 1570 aa2.55□□□□□ -2
RFC4-211ENST00000460408 NAALAD2Q9Y3Q0 740 aa2.55□□□□□ -2
RFC4-211ENST00000460408 NUP188Q5SRE5 1749 aa2.54□□□□□ -2
RFC4-211ENST00000460408 TNS1Q9HBL0 1735 aaKnown RBP2.54□□□□□ -2
RFC4-211ENST00000460408 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.54□□□□□ -2
RFC4-211ENST00000460408 RREB1Q92766 1687 aa2.54□□□□□ -2
RFC4-211ENST00000460408 NEXMIFQ5QGS0 1516 aa2.54□□□□□ -2
RFC4-211ENST00000460408 TMEM2Q9UHN6 1383 aa2.54□□□□□ -2
RFC4-211ENST00000460408 GRIN2DO15399 1336 aa2.54□□□□□ -2
RFC4-211ENST00000460408 FRG2CA6NGY1 282 aa2.54□□□□□ -2
RFC4-211ENST00000460408 WASHC1A8K0Z3 465 aa2.54□□□□□ -2
RFC4-211ENST00000460408 G3V3Y1 287 aa2.54□□□□□ -2
RFC4-211ENST00000460408 PPIHO43447 177 aaKnown RBP2.54□□□□□ -2
RFC4-211ENST00000460408 OR4F21O95013 312 aa2.54□□□□□ -2
RFC4-211ENST00000460408 SLC2A10O95528 541 aa2.54□□□□□ -2
RFC4-211ENST00000460408 THY1P04216 161 aa2.54□□□□□ -2
RFC4-211ENST00000460408 KRT6BP04259 564 aa2.54□□□□□ -2
RFC4-211ENST00000460408 GSTT2P0CG29 244 aa2.54□□□□□ -2
RFC4-211ENST00000460408 GSTT2BP0CG30 244 aa2.54□□□□□ -2
RFC4-211ENST00000460408 UMPSP11172 480 aa2.54□□□□□ -2
RFC4-211ENST00000460408 SDC1P18827 310 aa2.54□□□□□ -2
RFC4-211ENST00000460408 XRCC1P18887 633 aaPredicted RBP2.54□□□□□ -2
RFC4-211ENST00000460408 PAICSP22234 425 aaKnown RBP2.54□□□□□ -2
RFC4-211ENST00000460408 CYP2F1P24903 491 aa2.54□□□□□ -2
RFC4-211ENST00000460408 AXLP30530 894 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms