RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 FFAR1O14842 300 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 EMC8O43402 210 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 PAICSP22234 425 aaKnown RBP14.42□□□□□ -0.1
LMNB1-203ENST00000460265 KCNJ5P48544 419 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 SPHARQ15513 63 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 Q6ZSR6 202 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 LINC00469Q8N7U9 141 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 OR52P1PQ8NH57 321 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 MARC2Q969Z3 335 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 OR51V1Q9H2C8 321 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 SSR3Q9UNL2 185 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 ALG5Q9Y673 324 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 EPOPA6NHQ4 379 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 MPZL2O60487 215 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 CTHP32929 405 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 CCR4P51679 360 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 SHEQ5VZ18 495 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 FIGLAQ6QHK4 219 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 FAM111BQ6SJ93 734 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 OR56A1Q8NGH5 318 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 OR4D11Q8NGI4 311 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 OR10Z1Q8NGY1 313 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 GATAD2BQ8WXI9 593 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 CDS1Q92903 461 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 HYLS1Q96M11 299 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 OR7D2Q96RA2 312 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 C1QTNF2Q9BXJ5 285 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 ASPNQ9BXN1 380 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 TPSD1Q9BZJ3 242 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 TRAPPC4Q9Y296 219 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 HEBP2Q9Y5Z4 205 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 B4GALT2O60909 372 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 ADAP00813 363 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 CHRM4P08173 479 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 COL9A1P20849 921 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 ZNF10P21506 573 aaPredicted RBP14.42□□□□□ -0.1
LMNB1-203ENST00000460265 ETV6P41212 452 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 KIR2DL3P43628 341 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 PGDP52209 483 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 LARS2Q15031 903 aaKnown RBP14.42□□□□□ -0.1
LMNB1-203ENST00000460265 CRTC2Q53ET0 693 aaPredicted RBP14.42□□□□□ -0.1
LMNB1-203ENST00000460265 NRROSQ86YC3 692 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 FBLIM1Q8WUP2 373 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 TIMM29Q9BSF4 260 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 GTPBP2Q9BX10 602 aaKnown RBP14.42□□□□□ -0.1
LMNB1-203ENST00000460265 RDH8Q9NYR8 311 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 MALT1Q9UDY8 824 aa14.42□□□□□ -0.1
LMNB1-203ENST00000460265 ASXL3Q9C0F0 2248 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 IGKV1-8A0A0C4DH67 115 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 MRPS14O60783 128 aaKnown RBP14.41□□□□□ -0.1
LMNB1-203ENST00000460265 SSTR4P31391 388 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 SHC2P98077 582 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 ANGPT1Q15389 498 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 GLCCI1Q86VQ1 547 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 PRSS58Q8IYP2 241 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 C10orf53Q8N6V4 93 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 ZNF680Q8NEM1 530 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 OR5T3Q8NGG3 340 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 ZNF431Q8TF32 576 aaPredicted RBP14.41□□□□□ -0.1
LMNB1-203ENST00000460265 GPR174Q9BXC1 333 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 TTTY10Q9BZA0 68 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 RACGAP1Q9H0H5 632 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 DDX31Q9H8H2 851 aaKnown RBP14.41□□□□□ -0.1
LMNB1-203ENST00000460265 THSD1Q9NS62 852 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 SOHLH2Q9NX45 425 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 TNFRSF10DQ9UBN6 386 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 FAM183AA6NL82 134 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 C5orf67F2Z3F1 127 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 BMP7P18075 431 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 AKT2P31751 481 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 TRIM23P36406 574 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 FGFBP1Q14512 234 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 TBCEQ15813 527 aaPredicted RBP14.41□□□□□ -0.1
LMNB1-203ENST00000460265 NRMQ8IXM6 262 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 C7orf57Q8NEG2 295 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 OR8J1Q8NGP2 316 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 PIGXQ8TBF5 258 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 SLC22A18Q96BI1 424 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 DNAJA3Q96EY1 480 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 MCOLN1Q9GZU1 580 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 CHST8Q9H2A9 424 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 SIRT3Q9NTG7 399 aaPredicted RBP14.41□□□□□ -0.1
LMNB1-203ENST00000460265 ACSS1Q9NUB1 689 aaPredicted RBP14.41□□□□□ -0.1
LMNB1-203ENST00000460265 NLKQ9UBE8 527 aa14.41□□□□□ -0.1
LMNB1-203ENST00000460265 A0A0B4J293 547 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 MAN2B1O00754 1011 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 TBX6O95947 436 aaPredicted RBP14.4□□□□□ -0.1
LMNB1-203ENST00000460265 FCARP24071 287 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 MMP11P24347 488 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 HLA-DMAP28067 261 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 ABATP80404 500 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 TEKQ02763 1124 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 STX4Q12846 297 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 EXOSC7Q15024 291 aaKnown RBP14.4□□□□□ -0.1
LMNB1-203ENST00000460265 FBXO43Q4G163 708 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 OR2G6Q5TZ20 316 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 PLAG1Q6DJT9 500 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 LAMTOR1Q6IAA8 161 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 RDH10Q8IZV5 341 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 NLGN4YQ8NFZ3 816 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms