RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PRPF19Q9UMS4 504 aaKnown RBP9.58□□□□□ -0.88
USP39-210ENST00000459775 GPC6Q9Y625 555 aaPredicted RBP9.58□□□□□ -0.88
USP39-210ENST00000459775 COMMD3-BMI1R4GMX3 469 aa9.58□□□□□ -0.88
USP39-210ENST00000459775 SDK2Q58EX2 2172 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 IGF2RP11717 2491 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 AHCTF1Q8WYP5 2266 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 EVPLLA8MZ36 301 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 HMGN4O00479 90 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 ACOT8O14734 319 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 EMC8O43402 210 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 NDUFA2O43678 99 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 RBBP9O75884 186 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 ONECUT2O95948 504 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 CLPSP04118 112 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 ATP6V1B2P21281 511 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 EIF3IQ13347 325 aaKnown RBP9.57□□□□□ -0.88
USP39-210ENST00000459775 MAPK11Q15759 364 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 SFT2D3Q587I9 215 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 C16orf47Q6ZP98 133 aaPredicted RBP9.57□□□□□ -0.88
USP39-210ENST00000459775 ANKRD37Q7Z713 158 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 SPPL2CQ8IUH8 684 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 ZZZ3Q8IYH5 903 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 OR2L13Q8N349 312 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 OR52N2Q8NGI0 321 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 XAGE5Q8WWM1 108 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 FIG4Q92562 907 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 CTHRC1Q96CG8 243 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 SENP5Q96HI0 755 aaPredicted RBP9.57□□□□□ -0.88
USP39-210ENST00000459775 NRSN2Q9GZP1 204 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 POLR1BQ9H9Y6 1135 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 GPN3Q9UHW5 284 aaPredicted RBP9.57□□□□□ -0.88
USP39-210ENST00000459775 PCDHGA3Q9Y5H0 932 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 LAMA5O15230 3695 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 LOC400499M0QZD8 3231 aa9.57□□□□□ -0.88
USP39-210ENST00000459775 LOC101059948A0A1B0GTJ6 334 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 DOK2O60496 412 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 DDAH2O95865 285 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 CELA2AP08217 269 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 MATN1P21941 496 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 IFNA8P32881 189 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 EEFSECP57772 596 aaKnown RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 RPP30P78346 268 aaKnown RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 ELF3P78545 371 aaPredicted RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 CCNIQ14094 377 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 SYPL1Q16563 259 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 OCLNQ16625 522 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 CCNJQ5T5M9 372 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 SLC38A6Q8IZM9 456 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 BHLHE22Q8NFJ8 381 aaPredicted RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 OR4N2Q8NGD1 307 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 POC1BQ8TC44 478 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 PIK3R3Q92569 461 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 SLC35A4Q96G79 324 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 SLC35G5Q96KT7 338 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 LRFN5Q96NI6 719 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 LMF1Q96S06 567 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 NUDT9Q9BW91 350 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 RSPO3Q9BXY4 272 aaPredicted RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 FBXO34Q9NWN3 711 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 IL17BQ9UHF5 180 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 MMACHCQ9Y4U1 282 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 CLCA3PQ9Y6N3 262 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 GXYLT2A0PJZ3 443 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 CDC14CA4D256 554 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 CFAP73A6NFT4 308 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 C9J4A7 227 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 ARPC2O15144 300 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 GATCO43716 136 aaKnown RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 GCM2O75603 506 aaPredicted RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 DNAJB5O75953 348 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 HRGP04196 525 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 CCNYL3P0C7X3 344 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 ACP2P11117 423 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 HSD17B1P14061 328 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 CCNA2P20248 432 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 EMDP50402 254 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 FUT5Q11128 374 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 MAP4K2Q12851 820 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 TRIM25Q14258 630 aaKnown RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 DUSP5Q16690 384 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 MFSD12Q6NUT3 480 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 TMEM64Q6YI46 380 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 CDH24Q86UP0 819 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 FAM86B1Q8N7N1 296 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 ANKFN1Q8N957 763 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 PLPP5Q8NEB5 264 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 DNAJB8Q8NHS0 232 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 NFKBIDQ8NI38 313 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 SLC2A12Q8TD20 617 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 SLC39A7Q92504 469 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 CDS1Q92903 461 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 ZNF566Q969W8 418 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 RAB3IPQ96QF0 476 aaPredicted RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 OR7D2Q96RA2 312 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 WDR77Q9BQA1 342 aaPredicted RBP9.56□□□□□ -0.88
USP39-210ENST00000459775 SLC26A1Q9H2B4 701 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 C3orf14Q9HBI5 128 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 ASCL3Q9NQ33 180 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 ADPRHL2Q9NX46 363 aa9.56□□□□□ -0.88
USP39-210ENST00000459775 AASSQ9UDR5 926 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms