RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 RBMS1P29558 406 aaKnown RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 GDI1P31150 447 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SLC6A6P31641 620 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 AKT2P31751 481 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 NUDT1P36639 197 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 KIR2DL1P43626 348 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 RFX2P48378 723 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 EVX1P49640 407 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 ACTA2P62736 377 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 ACTG2P63267 376 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 FABP5Q01469 135 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 MXD1Q05195 221 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 LGALS3BPQ08380 585 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 ILF3Q12906 894 aaKnown RBP eCLIP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 FOXD4Q12950 439 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 GALEQ14376 348 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 KIR2DS5Q14953 304 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 AMZ1Q400G9 498 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 DCST2Q5T1A1 773 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 ATAD3CQ5T2N8 411 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 GARNL3Q5VVW2 1013 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 HBMQ6B0K9 141 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D3CQ6IPX1 549 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 NIPAL3Q6P499 406 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SYCE2Q6PIF2 218 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF550Q7Z398 422 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 VN1R4Q7Z5H5 301 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 COMTD1Q86VU5 262 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 MARCH9Q86YJ5 346 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 GRAMD2AQ8IUY3 354 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 CMIPQ8IY22 773 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TBC1D3Q8IZP1 549 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TCTE3Q8IZS6 198 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 MS4A15Q8N5U1 240 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 CELF2-AS1Q8N7Q2 184 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 C12orf76Q8N812 135 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TEX19Q8NA77 164 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 DUSP18Q8NEJ0 188 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 OR7G2Q8NG99 324 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 OR4E2Q8NGC2 313 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 OR4Q3Q8NH05 313 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 OR4C6Q8NH72 309 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TMEM239Q8WW34 195 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TM9SF4Q92544 642 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 PHYHIPQ92561 330 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 CDS1Q92903 461 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TRMT61AQ96FX7 289 aaKnown RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SLC35A4Q96G79 324 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF578Q96N58 590 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 MYADMQ96S97 322 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SECISBP2Q96T21 854 aaKnown RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SDF2Q99470 211 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 GPA33Q99795 319 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SOSTQ9BQB4 213 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TRIM2Q9C040 744 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 MIXL1Q9H2W2 232 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 OR52D1Q9H346 318 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 UBQLN3Q9H347 655 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TPK1Q9H3S4 243 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SLA2Q9H6Q3 261 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 FOLH1BQ9HBA9 442 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 FGF22Q9HCT0 170 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 CMC2Q9NRP2 79 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 RBFOX1Q9NWB1 397 aaKnown RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TOR4AQ9NXH8 423 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 BABAM2Q9NXR7 383 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SPHK1Q9NYA1 384 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 KCMF1Q9P0J7 381 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SERGEFQ9UGK8 458 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SLC7A7Q9UM01 511 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 SLC35A3Q9Y2D2 325 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 NOX1Q9Y5S8 564 aa8.24□□□□□ -1.09
HDAC3-202ENST00000459727 TCF20Q9UGU0 1960 aaKnown RBP8.24□□□□□ -1.09
HDAC3-202ENST00000459727 DAPL1A0PJW8 107 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CDHR4A6H8M9 788 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 C4orf51C9J302 202 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 FAM47E-STBD1D6RA91 191 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 J3QRE1 110 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 PPM1DO15297 605 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ARHGEF9O43307 516 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 RNF13O43567 381 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 SLC43A1O75387 559 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 PRKRAO75569 313 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ITGA10O75578 1167 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 PPM1BO75688 479 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 GPR75O95800 540 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CD1AP06126 327 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CSF3P09919 207 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 GSTT2P0CG29 244 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 GSTT2BP0CG30 244 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 HOXB2P14652 356 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 UGT2B7P16662 529 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 HK1P19367 917 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 CELP19835 753 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 AZGP1P25311 298 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ERP29P30040 261 aaKnown RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ACSL1P33121 698 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 TRHRP34981 398 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-202ENST00000459727 ACTR1BP42025 376 aa8.23□□□□□ -1.09
HDAC3-202ENST00000459727 NR4A2P43354 598 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms