RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PPIL3Q9H2H8 161 aaKnown RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 DDX31Q9H8H2 851 aaKnown RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ISG20L2Q9H9L3 353 aaKnown RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 POLMQ9NP87 494 aaPredicted RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 PRDM7Q9NQW5 492 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 TMEM74BQ9NUR3 256 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 SLC23A1Q9UHI7 598 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 KLF15Q9UIH9 416 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 AP1M2Q9Y6Q5 423 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 AKAP8O43823 692 aaKnown RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ZNF780AO75290 641 aaPredicted RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 CLEC3AO75596 197 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 DDX5P17844 614 aaKnown RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ALAS2P22557 587 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 MTNR1AP48039 350 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 P2RX3P56373 397 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 QPRTQ15274 297 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ZNF628Q5EBL2 1059 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 Q6ZSR6 202 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ASB18Q6ZVZ8 466 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 TMEFF1Q8IYR6 380 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 TDHQ8IZJ6 230 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 FAM26EQ8N5C1 309 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 DEDD2Q8WXF8 326 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 NACC2Q96BF6 587 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 WDR92Q96MX6 357 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 POLDIP3Q9BY77 421 aaKnown RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 MED20Q9H944 212 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 CLEC4AQ9UMR7 237 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ZSCAN5BA6NJL1 495 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 ICMTO60725 284 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 IL1AP01583 271 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 HMGN2P05204 90 aaKnown RBP11.58□□□□□ -0.56
LINC00959-201ENST00000456581 PVRP15151 417 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 POLR2CP19387 275 aaPredicted RBP11.58□□□□□ -0.56
LINC00959-201ENST00000456581 DRD1P21728 446 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 HNRNPA2B1P22626 353 aaKnown RBP11.58□□□□□ -0.56
LINC00959-201ENST00000456581 CHRNEQ04844 493 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 FAPQ12884 760 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 OCLNQ16625 522 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 PLK5Q496M5 336 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 PRRT3Q5FWE3 981 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 PLET1Q6UQ28 207 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 NRROSQ86YC3 692 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 NKAIN4Q8IVV8 208 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 SLC22A18ASQ8N1D0 253 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 DEFB119Q8N690 84 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.58□□□□□ -0.56
LINC00959-201ENST00000456581 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 ZNF607Q96SK3 696 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 TTTY10Q9BZA0 68 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 TTYH1Q9H313 450 aaPredicted RBP11.58□□□□□ -0.56
LINC00959-201ENST00000456581 SEMA4GQ9NTN9 838 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 MAT2BQ9NZL9 334 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 ACAD8Q9UKU7 415 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 CYP8B1Q9UNU6 501 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 CLCA2Q9UQC9 943 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 HSPB11Q9Y547 144 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 SOCS6O14544 535 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 NR2F6P10588 404 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 TBXA2RP21731 343 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 UQCRC1P31930 480 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 CDK5Q00535 292 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 C1orf61Q13536 156 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 CCINQ13939 588 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 ZIC1Q15915 447 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 TJAP1Q5JTD0 557 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 ABHD17CQ6PCB6 329 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 QSOX2Q6ZRP7 698 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 VN1R4Q7Z5H5 301 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 MARCH9Q86YJ5 346 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 FAM181AQ8N9Y4 354 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 OR4Q3Q8NH05 313 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 CNRIP1Q96F85 164 aaPredicted RBP11.58□□□□□ -0.56
LINC00959-201ENST00000456581 AMDHD1Q96NU7 426 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 SRMSQ9H3Y6 488 aa11.58□□□□□ -0.56
LINC00959-201ENST00000456581 A0A1W2PRQ8 180 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 FAM170BA6NMN3 283 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 FCMRO60667 390 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 CTSVO60911 334 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 YES1P07947 543 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 HIST1H1TP22492 207 aaPredicted RBP11.57□□□□□ -0.56
LINC00959-201ENST00000456581 ATP5A1P25705 553 aaKnown RBP11.57□□□□□ -0.56
LINC00959-201ENST00000456581 MAP2K3P46734 347 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 SRP54P61011 504 aaKnown RBP11.57□□□□□ -0.56
LINC00959-201ENST00000456581 PPP1CAP62136 330 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 LTB4RQ15722 352 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 TRIQKQ629K1 86 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 VASNQ6EMK4 673 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 GDPGP1Q6ZNW5 385 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 OR4M2Q8NGB6 313 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 ZCCHC10Q8TBK6 192 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 UFD1Q92890 307 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 MAP6Q96JE9 813 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 ATF6BQ99941 703 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 NT5DC2Q9H857 520 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 P2RX2Q9UBL9 471 aa11.57□□□□□ -0.56
LINC00959-201ENST00000456581 CHST2Q9Y4C5 530 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms