RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 EMC8O43402 210 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 TSPAN2O60636 221 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 UQCRC2P22695 453 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 SLC6A2P23975 617 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 RFX3P48380 749 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 CLK3P49761 638 aaKnown RBP16.2■□□□□ 0.18
COPS7A-202ENST00000455113 DNAL1Q4LDG9 190 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 RUNDC3AQ59EK9 446 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 ASRGL1Q7L266 308 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 CDRT4Q8N9R6 151 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 OR4N2Q8NGD1 307 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 OR5M9Q8NGP3 310 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 GPR151Q8TDV0 419 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 MS4A4EQ96PG1 132 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 SLC35A5Q9BS91 424 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 LMF2Q9BU23 707 aaKnown RBP16.2■□□□□ 0.18
COPS7A-202ENST00000455113 GALNT9Q9HCQ5 603 aa16.2■□□□□ 0.18
COPS7A-202ENST00000455113 SNPHO15079 494 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 WDR1O75083 606 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 CBR3O75828 277 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 PSMG1O95456 288 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 C1QCP02747 245 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 GABRA1P14867 456 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 GABRA3P34903 492 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 CCT3P49368 545 aaKnown RBP16.19■□□□□ 0.18
COPS7A-202ENST00000455113 ADORA2A-AS1P86434 159 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 SPDYE7PQ495Y7 208 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 RABL3Q5HYI8 236 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 DESI1Q6ICB0 168 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 ZFP90Q8TF47 636 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 CA5BP1Q8WTZ4 195 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 SLC9A6Q92581 669 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 FAM120BQ96EK7 910 aaKnown RBP16.19■□□□□ 0.18
COPS7A-202ENST00000455113 SLC6A15Q9H2J7 730 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 TPT1P8Q9HAU6 139 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 SPAG4Q9NPE6 437 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 SDHAF3Q9NRP4 125 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 PNPLA3Q9NST1 481 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 KLF2Q9Y5W3 355 aaPredicted RBP16.19■□□□□ 0.18
COPS7A-202ENST00000455113 WIF1Q9Y5W5 379 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 DOPEY1Q5JWR5 2465 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 RNF103-CHMP3A0A140T963 221 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 CLIC1O00299 241 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 HPNP05981 417 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 ACVR2AP27037 513 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 PRIM2P49643 509 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 SLC7A2P52569 658 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 MTPNP58546 118 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 SELPLGQ14242 412 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 ZCCHC12Q6PEW1 402 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 ARPINQ7Z6K5 226 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 SLC15A3Q8IY34 581 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 OR8J3Q8NGG0 315 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 RND1Q92730 232 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 DMRTA2Q96SC8 542 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 CDRT15Q96T59 188 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 CPPED1Q9BRF8 314 aaPredicted RBP16.19■□□□□ 0.18
COPS7A-202ENST00000455113 CADM1Q9BY67 442 aaKnown RBP16.19■□□□□ 0.18
COPS7A-202ENST00000455113 UBQLN3Q9H347 655 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 IKZF5Q9H5V7 419 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 CHST11Q9NPF2 352 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 ZCCHC3Q9NUD5 404 aaKnown RBP16.19■□□□□ 0.18
COPS7A-202ENST00000455113 TNFRSF10DQ9UBN6 386 aa16.19■□□□□ 0.18
COPS7A-202ENST00000455113 NCKAP5O14513 1909 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 FREM3P0C091 2139 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 C2orf72A6NCS6 295 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 GSC2O15499 205 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 DNAJC8O75937 253 aaPredicted RBP16.18■□□□□ 0.18
COPS7A-202ENST00000455113 HOXD4P09016 255 aaPredicted RBP16.18■□□□□ 0.18
COPS7A-202ENST00000455113 CHI3L1P36222 383 aaPredicted RBP16.18■□□□□ 0.18
COPS7A-202ENST00000455113 SF3B4Q15427 424 aaKnown RBP eCLIP16.18■□□□□ 0.18
COPS7A-202ENST00000455113 FNDC7Q5VTL7 733 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 B3GNT6Q6ZMB0 384 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 WDR53Q7Z5U6 358 aaPredicted RBP16.18■□□□□ 0.18
COPS7A-202ENST00000455113 PNPT1Q8TCS8 783 aaKnown RBP16.18■□□□□ 0.18
COPS7A-202ENST00000455113 SFXN5Q8TD22 340 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 JADE3Q92613 823 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 SDCCAG3Q96C92 435 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 THUMPD3Q9BV44 507 aaKnown RBP16.18■□□□□ 0.18
COPS7A-202ENST00000455113 CMTM6Q9NX76 183 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 ADA2Q9NZK5 511 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 PCDHGB3Q9Y5G1 929 aa16.18■□□□□ 0.18
COPS7A-202ENST00000455113 CLDN14O95500 239 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 EVI2BP34910 448 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 PTGDSP41222 190 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 TP53BP2Q13625 1128 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 BHLHB9Q6PI77 547 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 PLCZ1Q86YW0 608 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 PM20D2Q8IYS1 436 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 OR10Q1Q8NGQ4 319 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 OR14L1PQ8NHC6 308 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 MOAP1Q96BY2 351 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 SH3GL1Q99961 368 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 THTPAQ9BU02 230 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 NTMQ9P121 344 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 PPP4R1LQ9P1A2 415 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 TMEM181Q9P2C4 612 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 ABCD2Q9UBJ2 740 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 ABCG2Q9UNQ0 655 aa16.17■□□□□ 0.18
COPS7A-202ENST00000455113 L3MBTL1Q9Y468 752 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms