RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 A0A0J9YW62 118 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 AZIN1O14977 448 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 KLF4O43474 513 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 PLAUP00749 431 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 POU2F1P14859 743 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 RNF144AP50876 292 aaPredicted RBP14.37□□□□□ -0.11
GPC1-206ENST00000455111 PRKAG1P54619 331 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 RPL38P63173 70 aaKnown RBP14.37□□□□□ -0.11
GPC1-206ENST00000455111 EEF1A1P68104 462 aaKnown RBP14.37□□□□□ -0.11
GPC1-206ENST00000455111 LTBQ06643 244 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 C17orf67Q0P5P2 114 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 PLPPR5Q32ZL2 321 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 EEF1A1P5Q5VTE0 462 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 MFSD12Q6NUT3 480 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 OR2W6PQ8NHA6 318 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 ZC3HAV1LQ96H79 300 aaKnown RBP14.37□□□□□ -0.11
GPC1-206ENST00000455111 METTL2AQ96IZ6 378 aaKnown RBP14.37□□□□□ -0.11
GPC1-206ENST00000455111 MECRQ9BV79 373 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 NEUROD4Q9HD90 331 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 SDHAF3Q9NRP4 125 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 NDRG3Q9UGV2 375 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 KCNE3Q9Y6H6 103 aa14.37□□□□□ -0.11
GPC1-206ENST00000455111 A0A1W2PRB8 838 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 SLC28A1O00337 649 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 EIF1AYO14602 144 aaKnown RBP14.36□□□□□ -0.11
GPC1-206ENST00000455111 NGFRP08138 427 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 INHBBP09529 407 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 KRT4P19013 534 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 TBXA2RP21731 343 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 ALDH3A1P30838 453 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 OCRLQ01968 901 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 ACKR1Q16570 336 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 Q5PR19 223 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 STAC2Q6ZMT1 411 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 FAM214BQ7L5A3 538 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 BIVMQ86UB2 503 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 GTPBP8Q8N3Z3 284 aaPredicted RBP14.36□□□□□ -0.11
GPC1-206ENST00000455111 CDRT4Q8N9R6 151 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 OR10D3Q8NH80 312 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 KIF18AQ8NI77 898 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 FAM120BQ96EK7 910 aaKnown RBP14.36□□□□□ -0.11
GPC1-206ENST00000455111 C3orf30Q96M34 536 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 PIP5K1AQ99755 562 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 TBL1XR1Q9BZK7 514 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 PTGES2Q9H7Z7 377 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 PLSCR4Q9NRQ2 329 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 MED17Q9NVC6 651 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 ELOVL5Q9NYP7 299 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 SLC17A7Q9P2U7 560 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 FREM1Q5H8C1 2179 aa14.36□□□□□ -0.11
GPC1-206ENST00000455111 ZANQ9Y493 2812 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 NPIPA5A0A0B4J1W7 369 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 NPIPA7E9PJI5 369 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 C16orf97H3BN30 126 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 H3BQF6 201 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 LINC01387J3KSC0 135 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 COPEO14579 308 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 CASKO14936 926 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 CXCL13O43927 109 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 SS18L1O75177 396 aaPredicted RBP14.35□□□□□ -0.11
GPC1-206ENST00000455111 KCNH1O95259 989 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 NTN1O95631 604 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 LINGO3P0C6S8 592 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 NPIPA8P0DM63 369 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 BCKDHAP12694 445 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 CREB1P16220 341 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 ZNF17P17021 662 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 GPC1P35052 558 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 EIF1AXP47813 144 aaKnown RBP14.35□□□□□ -0.11
GPC1-206ENST00000455111 PRIM2P49643 509 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 ZNHIT3Q15649 155 aaPredicted RBP14.35□□□□□ -0.11
GPC1-206ENST00000455111 XKR7Q5GH72 579 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 CFAP157Q5JU67 520 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.35□□□□□ -0.11
GPC1-206ENST00000455111 CBLN3Q6UW01 205 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 CHMP1BQ7LBR1 199 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 OR7A2PQ8NGA2 310 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 UBLCP1Q8WVY7 318 aaPredicted RBP14.35□□□□□ -0.11
GPC1-206ENST00000455111 PPCDCQ96CD2 204 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 SH3YL1Q96HL8 342 aaPredicted RBP14.35□□□□□ -0.11
GPC1-206ENST00000455111 COX4I2Q96KJ9 171 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 RNF145Q96MT1 663 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 MED18Q9BUE0 208 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 TMEM185BQ9H7F4 350 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 UBTD1Q9HAC8 227 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 ACSS1Q9NUB1 689 aaPredicted RBP14.35□□□□□ -0.11
GPC1-206ENST00000455111 SH3BP4Q9P0V3 963 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 EDARQ9UNE0 448 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 PROCRQ9UNN8 238 aa14.35□□□□□ -0.11
GPC1-206ENST00000455111 EIF3LQ9Y262 564 aaKnown RBP14.35□□□□□ -0.11
GPC1-206ENST00000455111 NUP214P35658 2090 aaPredicted RBP14.35□□□□□ -0.11
GPC1-206ENST00000455111 NAV3Q8IVL0 2385 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 C7orf72A4D263 438 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 TNFSF11O14788 317 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 PIP5K1BO14986 540 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 ADAMDEC1O15204 470 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 RGS14O43566 566 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 CRCPO75575 148 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 LY6G6DO95868 133 aa14.34□□□□□ -0.11
GPC1-206ENST00000455111 LAMP1P11279 417 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms