RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 GPR68Q15743 365 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 TBR1Q16650 682 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 LIN52Q52LA3 116 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 CYBRD1Q53TN4 286 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 TUBA3EQ6PEY2 450 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 OLIG3Q7RTU3 272 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 ARMC8Q8IUR7 673 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 FAM13CQ8NE31 585 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 OR10G3Q8NGC4 313 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 FAM162AQ96A26 154 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 NODALQ96S42 347 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 UTP23Q9BRU9 249 aaKnown RBP10.32□□□□□ -0.76
TRAF4-206ENST00000454852 DOHHQ9BU89 302 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 ANGPTL4Q9BY76 406 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 PRORYQ9H606 182 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 EXOSC3Q9NQT5 275 aaKnown RBP10.32□□□□□ -0.76
TRAF4-206ENST00000454852 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-206ENST00000454852 HPF1Q9NWY4 346 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 SEC14L3Q9UDX4 400 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 TUBD1Q9UJT1 453 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 CNOT11Q9UKZ1 510 aaKnown RBP10.32□□□□□ -0.76
TRAF4-206ENST00000454852 BAG5Q9UL15 447 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 ZNF232Q9UNY5 417 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 ZNF443Q9Y2A4 671 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-206ENST00000454852 SLC35A3Q9Y2D2 325 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 CHST2Q9Y4C5 530 aa10.32□□□□□ -0.76
TRAF4-206ENST00000454852 ANKRD11Q6UB99 2663 aaPredicted RBP10.31□□□□□ -0.76
TRAF4-206ENST00000454852 CENPVL1A0A0U1RR11 272 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 CDHR4A6H8M9 788 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 SERINC4A6NH21 518 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 SCDO00767 359 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 SUV39H1O43463 412 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 WDPCPO95876 746 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 LGI1O95970 557 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 SERPINA1P01009 418 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 SEMG1P04279 462 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 GPIP06744 558 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 IL7RP16871 459 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 AQP1P29972 269 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 CD96P40200 585 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 PTGDSP41222 190 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 CASP3P42574 277 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 RFX3P48380 749 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 CLK3P49761 638 aaKnown RBP10.31□□□□□ -0.76
TRAF4-206ENST00000454852 KCNJ10P78508 379 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 RHDQ02161 417 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 PLAURQ03405 335 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 DUSP7Q16829 419 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 EIPR1Q53HC9 387 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 ZNF311Q5JNZ3 666 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 PDZK1Q5T2W1 519 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 C1orf146Q5VVC0 180 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 SLC22A10Q63ZE4 541 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 SLC30A6Q6NXT4 461 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 IL20RBQ6UXL0 311 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 APOOLQ6UXV4 268 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 GALNT10Q86SR1 603 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 SPPL2CQ8IUH8 684 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 CYP4Z2PQ8N1L4 340 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 MDS2Q8NDY4 140 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 TOR1AIP2Q8NFQ8 470 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 GPR32P1Q8NGA4 272 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 GRHL3Q8TE85 626 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 WDR60Q8WVS4 1066 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 LZICQ8WZA0 190 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 QRSL1Q9H0R6 528 aaKnown RBP10.31□□□□□ -0.76
TRAF4-206ENST00000454852 ARMC7Q9H6L4 198 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 MAGIXQ9H6Y5 334 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 CACYBPQ9HB71 228 aaKnown RBP10.31□□□□□ -0.76
TRAF4-206ENST00000454852 ADPRHL2Q9NX46 363 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 FLRT3Q9NZU0 649 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 LRFN1Q9P244 771 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 DMXL2Q8TDJ6 3036 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 CHD8Q9HCK8 2581 aa10.31□□□□□ -0.76
TRAF4-206ENST00000454852 LAMA5O15230 3695 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 NPIPA5A0A0B4J1W7 369 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 PRAMEF25A6NGN4 478 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 A6NL46 340 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 NPIPA7E9PJI5 369 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 H3BNH8 94 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 EIF4E2O60573 245 aaKnown RBP10.3□□□□□ -0.76
TRAF4-206ENST00000454852 SNX4O95219 450 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 EPPINO95925 133 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 FESP07332 822 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 NPIPA8P0DM63 369 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 TNFSF10P50591 281 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 CXADRP78310 365 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 CCNIQ14094 377 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 OR1C1Q15619 314 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 LRRC23Q53EV4 343 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-206ENST00000454852 DESI1Q6ICB0 168 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 ZNF836Q6ZNA1 936 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 LINC00696Q6ZRV3 163 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 VRK2Q86Y07 508 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 C10orf67Q8IYJ2 551 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 PSD4Q8NDX1 1056 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 SLC26A7Q8TE54 656 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 TM9SF4Q92544 642 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 SCMH1Q96GD3 660 aa10.3□□□□□ -0.76
TRAF4-206ENST00000454852 TMEM41AQ96HV5 264 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms