RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 EFHD2Q96C19 240 aaPredicted RBP12.68□□□□□ -0.38
CLK3-203ENST00000454830 SAMD8Q96LT4 415 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 MGLLQ99685 303 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 PRRG3Q9BZD7 231 aa12.68□□□□□ -0.38
CLK3-203ENST00000454830 C6orf62Q9GZU0 229 aaPredicted RBP12.68□□□□□ -0.38
CLK3-203ENST00000454830 TMEM184BQ9Y519 407 aaPredicted RBP12.68□□□□□ -0.38
CLK3-203ENST00000454830 THADAQ6YHU6 1953 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 TGFBR3LH3BV60 316 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 DYRK3O43781 588 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 BMP7P18075 431 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 MYL12AP19105 171 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 TSPAN31Q12999 210 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 KIF18BQ86Y91 864 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 OR51A7Q8NH64 312 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 STACQ99469 402 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 OR51E2Q9H255 320 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 DCSTAMPQ9H295 470 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 ZBTB20Q9HC78 741 aaPredicted RBP12.67□□□□□ -0.38
CLK3-203ENST00000454830 ATP13A2Q9NQ11 1180 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 KCNE5Q9UJ90 142 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 CARD8Q9Y2G2 431 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 DSPPQ9NZW4 1301 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 GABARAPO95166 117 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 OR5F1O95221 314 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 SOX18P35713 384 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 RPS7P62081 194 aaKnown RBP12.67□□□□□ -0.38
CLK3-203ENST00000454830 MGAT2Q10469 447 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 C1DQ13901 141 aaKnown RBP12.67□□□□□ -0.38
CLK3-203ENST00000454830 NDUFAF6Q330K2 333 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 ARHGAP40Q5TG30 622 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 SDR16C5Q8N3Y7 309 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 OR52L1Q8NGH7 329 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 PFN4Q8NHR9 129 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 RELTQ969Z4 430 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 HSPBAP1Q96EW2 488 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 TMEM80Q96HE8 168 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 PSD2Q9BQI7 771 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 ATXN7L1Q9ULK2 861 aaPredicted RBP12.67□□□□□ -0.38
CLK3-203ENST00000454830 CSNK1G3Q9Y6M4 447 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 LRP4O75096 1905 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 PRAMEF2O60811 474 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 SERPINI2O75830 405 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 AK1P00568 194 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 GCGRP47871 477 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 DBPQ10586 325 aaPredicted RBP12.67□□□□□ -0.38
CLK3-203ENST00000454830 FAM53BQ14153 422 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 NR4A3Q92570 626 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 POLR2J2Q9GZM3 115 aaKnown RBP12.67□□□□□ -0.38
CLK3-203ENST00000454830 OR10A5Q9H207 317 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 NTMQ9P121 344 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 CACNA1EQ15878 2313 aa12.67□□□□□ -0.38
CLK3-203ENST00000454830 IGHV1OR21-1A0A087WYE8 117 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 SNTNA6NMZ2 147 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 CALRP27797 417 aaKnown RBP12.66□□□□□ -0.38
CLK3-203ENST00000454830 NOS3P29474 1203 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 HSD11B2P80365 405 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 PSG6Q00889 435 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 KLHL12Q53G59 568 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 LYSMD4Q5XG99 296 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 PAQR6Q6TCH4 344 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 SLC25A45Q8N413 288 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 RCBTB1Q8NDN9 531 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 C16orf52Q8NHV5 167 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 TSLPQ969D9 159 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 YIPF6Q96EC8 236 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 RNF167Q9H6Y7 350 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 NECTIN3Q9NQS3 549 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 MYO15AQ9UKN7 3530 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 FAM183AA6NL82 134 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 MRPS14O60783 128 aaKnown RBP12.66□□□□□ -0.38
CLK3-203ENST00000454830 SOX3P41225 446 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 BMXP51813 675 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 ZP2Q05996 745 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 UBE2UQ5VVX9 321 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 ZCCHC12Q6PEW1 402 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 B3GLCTQ6Y288 498 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 PRR22Q8IZ63 422 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 OR8D4Q8NGM9 314 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 OR9Q1Q8NGQ5 310 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 TMEM239Q8WW34 195 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 TRUB1Q8WWH5 349 aaKnown RBP12.66□□□□□ -0.38
CLK3-203ENST00000454830 NUDT22Q9BRQ3 303 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 PCED1AQ9H1Q7 454 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 TOR4AQ9NXH8 423 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 EPHA6Q9UF33 1036 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 CNTRLQ7Z7A1 2325 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 CDC14CA4D256 554 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 CDHR4A6H8M9 788 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 M0R082 166 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 BRINP1O60477 761 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 PDGFBP01127 241 aaPredicted RBP12.66□□□□□ -0.38
CLK3-203ENST00000454830 RPLP0P05388 317 aaKnown RBP12.66□□□□□ -0.38
CLK3-203ENST00000454830 THBS1P07996 1170 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 EMDP50402 254 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 EEF1A1P68104 462 aaKnown RBP12.66□□□□□ -0.38
CLK3-203ENST00000454830 ANKDD1AQ495B1 522 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 VWA2Q5GFL6 755 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 C12orf73Q69YU5 71 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 C10orf53Q8N6V4 93 aa12.66□□□□□ -0.38
CLK3-203ENST00000454830 C9orf43Q8TAL5 461 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms