RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 OR4A4PQ8NGN8 299 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 OR14A16Q8NHC5 309 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 NUBPLQ8TB37 319 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 HMGCLL1Q8TB92 370 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 NANPQ8TBE9 248 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ARRDC2Q8TBH0 407 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 TCP10LQ8TDR4 215 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 TMEM239Q8WW34 195 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 TMEM19Q96HH6 336 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 BOD1Q96IK1 185 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 JSRP1Q96MG2 331 aaPredicted RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 UHRF2Q96PU4 802 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 CSPG4P5Q96PW8 444 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 SH2D3AQ9BRG2 576 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 SLC30A2Q9BRI3 323 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 GPR174Q9BXC1 333 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 RAB11FIP5Q9BXF6 653 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 TEX101Q9BY14 249 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 NXF3Q9H4D5 531 aaKnown RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 WDR55Q9H6Y2 383 aaPredicted RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 EGLN3Q9H6Z9 239 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ATP13A3Q9H7F0 1226 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 CD209Q9NNX6 404 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 CHST11Q9NPF2 352 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZC4H2Q9NQZ6 224 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 NANSQ9NR45 359 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ABCB10Q9NRK6 738 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 DUSP22Q9NRW4 184 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 IMP3Q9NV31 184 aaKnown RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 AURKAIP1Q9NWT8 199 aaPredicted RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 POLKQ9UBT6 870 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 APOBEC3BQ9UH17 382 aaKnown RBP4□□□□□ -1.77
HMGB3P21-201ENST00000452483 DAPK2Q9UIK4 370 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 FZR1Q9UM11 496 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 ADAMTS5Q9UNA0 930 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 POLDIP2Q9Y2S7 368 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 OR1A2Q9Y585 309 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 SNED1Q8TER0 1413 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 PEG3Q9GZU2 1588 aa4□□□□□ -1.77
HMGB3P21-201ENST00000452483 KCNE1BA0A087WTH5 132 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ATP6AP2A0A1C7CYW4 349 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 A0A1W2PPC1 479 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 A0A1W2PPE3 182 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 BCLAF3A2AJT9 711 aaKnown RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 LRP5LA4QPB2 252 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 CENPXA8MT69 81 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 E7EWF7 191 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 POC1B-GALNT4F8VUJ3 575 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 H3BMH7 237 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 M0R3G1 203 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 B4GAT1O43505 415 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 SNAI2O43623 268 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 HUS1O60921 280 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 FZD7O75084 574 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 HSBP1O75506 76 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 FSHBP01225 129 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 GAPDHP04406 335 aaKnown RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 CD3GP09693 182 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 SLC35G4P0C7Q5 338 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ANXA3P12429 323 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ARSBP15848 533 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 HMGB2P26583 209 aaKnown RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 GIFP27352 417 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 GABRR2P28476 465 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 EPHX2P34913 555 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 RPL13AP40429 203 aaKnown RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ID1P41134 155 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 AQP2P41181 271 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 MAGEA2P43356 314 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 CCR8P51685 355 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 VAMP7P51809 220 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 PGGT1BP53609 377 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 RPL10AP62906 217 aaKnown RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 TUBA4AP68366 448 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 CYP24A1Q07973 514 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 CEACAM7Q14002 265 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 EFNB3Q15768 340 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 EXOC3L4Q17RC7 722 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ACSF3Q4G176 576 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 MTX3Q5HYI7 312 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 TCHHL1Q5QJ38 904 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 SEL1L2Q5TEA6 688 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 AGAP7PQ5VUJ5 663 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 PAPD7Q5XG87 772 aaKnown RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF776Q68DI1 518 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 NAIF1Q69YI7 327 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 DMKNQ6E0U4 476 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 OR4A47Q6IF82 309 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ZNF425Q6IV72 752 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 NEPROQ6NW34 567 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 FAM122CQ6P4D5 195 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 TMEM64Q6YI46 380 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 GCNT7Q6ZNI0 430 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 Q6ZRM9 215 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 SLC16A14Q7RTX9 510 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 RANBP3LQ86VV4 465 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 TRIM69Q86WT6 500 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 ERICH1Q86X53 443 aa3.99□□□□□ -1.77
HMGB3P21-201ENST00000452483 BOD1L2Q8IYS8 172 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms