RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TRMT10CQ7L0Y3 403 aaKnown RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 STK32CQ86UX6 486 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 WDR75Q8IWA0 830 aaKnown RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 GTPBP8Q8N3Z3 284 aaPredicted RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 NOA1Q8NC60 698 aaKnown RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 MNS1Q8NEH6 495 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 TMEM171Q8WVE6 324 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 ADGRG7Q96K78 797 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 PRRG4Q9BZD6 226 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 RRAGDQ9NQL2 400 aaPredicted RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 ZNF701Q9NV72 531 aaPredicted RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 VDAC3Q9Y277 283 aa9.76□□□□□ -0.85
USP1-204ENST00000452143 POLR3HQ9Y535 204 aaPredicted RBP9.76□□□□□ -0.85
USP1-204ENST00000452143 NPIPB8E9PQR5 432 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 UBFD1O14562 309 aaKnown RBP9.75□□□□□ -0.85
USP1-204ENST00000452143 SMAD7O15105 426 aaKnown RBP9.75□□□□□ -0.85
USP1-204ENST00000452143 ADAMDEC1O15204 470 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 PDPK1O15530 556 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 KLF4O43474 513 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 NDUFB5O43674 189 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 CRCPO75575 148 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 NKX2-2O95096 273 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 THBDP07204 575 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 PRPS2P11908 318 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 PSMB1P20618 241 aaKnown RBP9.75□□□□□ -0.85
USP1-204ENST00000452143 ME2P23368 584 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 PRPH2P23942 346 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 PCSK6P29122 969 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 LCN1P31025 176 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 GABRA3P34903 492 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 MAP3K8P41279 467 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 ZNF41P51814 821 aaPredicted RBP9.75□□□□□ -0.85
USP1-204ENST00000452143 RAC1P63000 192 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 SLC29A2Q14542 456 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.75□□□□□ -0.85
USP1-204ENST00000452143 CTU2Q2VPK5 515 aaKnown RBP9.75□□□□□ -0.85
USP1-204ENST00000452143 GRAMD1BQ3KR37 738 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 PPP4R4Q6NUP7 873 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 APOOLQ6UXV4 268 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 STAC2Q6ZMT1 411 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 FRMD7Q6ZUT3 714 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 C22orf34Q6ZV56 151 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 SH2D5Q6ZV89 423 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 ESPNLQ6ZVH7 1005 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 MISPQ8IVT2 679 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 ZNF611Q8N823 705 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 CDRT4Q8N9R6 151 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 OR10D3Q8NH80 312 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 CEP70Q8NHQ1 597 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 ZFP28Q8NHY6 868 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 GPR151Q8TDV0 419 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 ACTRT2Q8TDY3 377 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 ZNF775Q96BV0 537 aaPredicted RBP9.75□□□□□ -0.85
USP1-204ENST00000452143 C16orf45Q96MC5 204 aaPredicted RBP9.75□□□□□ -0.85
USP1-204ENST00000452143 MS4A4EQ96PG1 132 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 TMEM204Q9BSN7 226 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 PSMC3IPQ9P2W1 217 aaPredicted RBP9.75□□□□□ -0.85
USP1-204ENST00000452143 DCDC2Q9UHG0 476 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 PRR14LQ5THK1 2151 aa9.75□□□□□ -0.85
USP1-204ENST00000452143 CHD3Q12873 2000 aaKnown RBP9.75□□□□□ -0.85
USP1-204ENST00000452143 GXYLT2A0PJZ3 443 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 GOLGA8RI6L899 631 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 HS3ST1O14792 307 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 RIPK2O43353 540 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 TBX19O60806 448 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 GLRA3O75311 464 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 SYNGR4O95473 234 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 OXSR1O95747 527 aaPredicted RBP9.74□□□□□ -0.85
USP1-204ENST00000452143 HSPA4LO95757 839 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 IGKV1D-16P01601 117 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 TUBBP07437 444 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 PABPC4LP0CB38 370 aaKnown RBP9.74□□□□□ -0.85
USP1-204ENST00000452143 MYL2P10916 166 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 PSMA4P25789 261 aaKnown RBP9.74□□□□□ -0.85
USP1-204ENST00000452143 ELK4P28324 431 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 GPC1P35052 558 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 SLC6A8P48029 635 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 HSPB3Q12988 150 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 ETFDHQ16134 617 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 PLPPR5Q32ZL2 321 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 ANKRD34AQ69YU3 496 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 GTF2IRD2BQ6EKJ0 949 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 ZYG11AQ6WRX3 759 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 GTF2IRD2Q86UP8 949 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 EXOC3L1Q86VI1 746 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 CCNYL1Q8N7R7 359 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 OR6Y1Q8NGX8 325 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 OR2V1Q8NHB1 315 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 PIK3R3Q92569 461 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 SLC9A6Q92581 669 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 ZBED6CLQ96FA7 236 aaPredicted RBP9.74□□□□□ -0.85
USP1-204ENST00000452143 CCT7Q99832 543 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 ACTR6Q9GZN1 396 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 EQTNQ9NQ60 294 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 NTMQ9P121 344 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 GPR52Q9Y2T5 361 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 CCL27Q9Y4X3 112 aa9.74□□□□□ -0.85
USP1-204ENST00000452143 FBN1P35555 2871 aaKnown RBP9.73□□□□□ -0.85
USP1-204ENST00000452143 FREM1Q5H8C1 2179 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms