RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 FOPNLQ96NB1 174 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 C7orf50Q9BRJ6 194 aaKnown RBP16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 OR51I1Q9H343 314 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 PCDHB16Q9NRJ7 776 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 CFAP97Q9P2B7 532 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 P2RX2Q9UBL9 471 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 ING1Q9UK53 422 aaPredicted RBP16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 PLXND1Q9Y4D7 1925 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 F8A1P23610 371 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 PDHA2P29803 388 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 BUD31P41223 144 aaPredicted RBP16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 RPS7P62081 194 aaKnown RBP16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 BDH1Q02338 343 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 SREBF2Q12772 1141 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 KLF9Q13886 244 aaPredicted RBP16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 SFRP4Q6FHJ7 346 aaPredicted RBP16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 ARL9Q6T311 187 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 TBX5Q99593 518 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 WASH6PQ9NQA3 447 aa16.05■□□□□ 0.16
SCUBE2-202ENST00000450649 A0A0C4DFX4 3053 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 HNRNPCL2B2RXH8 293 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 LRRN3E7EW58 273 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 XPAP23025 273 aaPredicted RBP16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 VIPR1P32241 457 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 TMEM44Q2T9K0 475 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 FAM83HQ6ZRV2 1179 aaPredicted RBP16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 ESPNLQ6ZVH7 1005 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 GET4Q7L5D6 327 aaPredicted RBP16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 RRM2BQ7LG56 351 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 PRSS45Q7RTY3 260 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 SLITRK4Q8IW52 837 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 ANKRD53Q8N9V6 530 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 TIFAQ96CG3 184 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 SPATA5L1Q9BVQ7 753 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 GSDMCQ9BYG8 508 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 SLC6A15Q9H2J7 730 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 LRRN3Q9H3W5 708 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 WDR26Q9H7D7 661 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 RRAGCQ9HB90 399 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 EMC3Q9P0I2 261 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 H2AFY2Q9P0M6 372 aaPredicted RBP16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 IL20RAQ9UHF4 553 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 COPS3Q9UNS2 423 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 PDCD5O14737 125 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 FGF2P09038 288 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 RAB3AP20336 220 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 ATP5A1P25705 553 aaKnown RBP16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 PITPNAQ00169 270 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 CAP1Q01518 475 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 DHODHQ02127 395 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 CDC73Q6P1J9 531 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 ATRAIDQ6UW56 229 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 HSD11B1LQ7Z5J1 315 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 CEACAM19Q7Z692 300 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 WDR34Q96EX3 536 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 PELOQ9BRX2 385 aaKnown RBP16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 ALG8Q9BVK2 526 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 NEUROD4Q9HD90 331 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 PIPOXQ9P0Z9 390 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 MGAT4CQ9UBM8 478 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 TRPC4Q9UBN4 977 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 PRKAG2Q9UGJ0 569 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 FBXL2Q9UKC9 423 aa16.04■□□□□ 0.16
SCUBE2-202ENST00000450649 A0A0B4J203 849 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 FAM183AA6NL82 134 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 PGRMC2O15173 223 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 SOD2P04179 222 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 CKMP06732 381 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 VEGFCP49767 419 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 CTSCP53634 463 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 ERVK-21P61565 698 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 ETFDHQ16134 617 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 TPRA1Q86W33 373 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 BVESQ8NE79 360 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 OR11G2Q8NGC1 345 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 OR4D9Q8NGE8 314 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 HAVCR2Q8TDQ0 301 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 CNOT9Q92600 299 aaKnown RBP16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 PIGKQ92643 395 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 TIMP4Q99727 224 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 MRPL15Q9P015 296 aaKnown RBP16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 INSL5Q9Y5Q6 135 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 RTCAO00442 366 aaKnown RBP16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 TGM6O95932 706 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 NFYAP23511 347 aaPredicted RBP16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 IFNGR2P38484 337 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 RAB33AQ14088 237 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 ZNF169Q14929 603 aaPredicted RBP16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 C17orf107Q6ZR85 190 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 Q6ZVL8 140 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 CMTM8Q8IZV2 173 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 CHST14Q8NCH0 376 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 OR5W2Q8NH69 310 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 AUNIPQ9H7T9 357 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 HINT3Q9NQE9 182 aaKnown RBP16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 NPDC1Q9NQX5 325 aaPredicted RBP16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 PRKAB1Q9Y478 270 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 TET1Q8NFU7 2136 aa16.03■□□□□ 0.16
SCUBE2-202ENST00000450649 SLC5A10A0PJK1 596 aa16.02■□□□□ 0.16
SCUBE2-202ENST00000450649 GMDSO60547 372 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms