RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PHIPQ8WWQ0 1821 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 OR6C74A6NCV1 312 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 HHLA1C9JL84 531 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 ICOSLGO75144 302 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 PAK4O96013 591 aaPredicted RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 POMCP01189 267 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 TRBC1P01850 177 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 UBBP0CG47 229 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 UBCP0CG48 685 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 EIF2S3P41091 472 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 DGKGP49619 791 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 RPS27AP62979 156 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 UBA52P62987 128 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 SHC2P98077 582 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 RAB33AQ14088 237 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 SF1Q15637 639 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 ATP13A5Q4VNC0 1218 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 DCST1Q5T197 706 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 NBPF12Q5TAG4 269 aaPredicted RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 WSCD1Q658N2 575 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 ZNF626Q68DY1 528 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 CXorf57Q6NSI4 855 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 NPAS3Q8IXF0 933 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 OR6V1Q8N148 313 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 ARL6IP6Q8N6S5 226 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 TOP6BLQ8N6T0 577 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 BOLLQ8N9W6 283 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 FAM98AQ8NCA5 519 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 CHRDQ9H2X0 955 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 ELP3Q9H9T3 547 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 GPN1Q9HCN4 374 aaPredicted RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 CLEC4AQ9UMR7 237 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 ST3GAL5Q9UNP4 418 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 HS3ST4Q9Y661 456 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 POLR2AP24928 1970 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 A0A1B0GWJ7 208 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 LRIT2A6NDA9 550 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 SLC9B1P1A6NJY1 282 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 RFXAPO00287 272 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 FAAHO00519 579 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 TXNL1O43396 289 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 KLF4O43474 513 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 CLN5O75503 358 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 STX11O75558 287 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 STK16O75716 305 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 ZDHHC11BP0C7U3 371 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 FOLR2P14207 255 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 MUC1P15941 1255 aaPredicted RBP8.07□□□□□ -1.12
LSM5-208ENST00000450169 ELAVL4P26378 380 aaKnown RBP8.07□□□□□ -1.12
LSM5-208ENST00000450169 GDNFP39905 211 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 PTGER3P43115 390 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 LIM2P55344 173 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 OR10A3P58181 314 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 GMFBP60983 142 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 ACSM1Q08AH1 577 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 EIF4EBP2Q13542 120 aaPredicted RBP8.07□□□□□ -1.12
LSM5-208ENST00000450169 BOP1Q14137 746 aaKnown RBP8.07□□□□□ -1.12
LSM5-208ENST00000450169 GINS1Q14691 196 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 ATXN7L2Q5T6C5 722 aaPredicted RBP8.07□□□□□ -1.12
LSM5-208ENST00000450169 H3F3CQ6NXT2 135 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 PGBD2Q6P3X8 592 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 MTFR2Q6P444 385 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 SLC36A4Q6YBV0 504 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 TPRA1Q86W33 373 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 CFAP206Q8IYR0 622 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 LNX2Q8N448 690 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 HJURPQ8NCD3 748 aaPredicted RBP8.07□□□□□ -1.12
LSM5-208ENST00000450169 SLC25A28Q96A46 364 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 RAB7BQ96AH8 199 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 PCED1BQ96HM7 432 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 SUSD3Q96L08 255 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 TMEM68Q96MH6 324 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 TM6SF2Q9BZW4 377 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 ZYG11BQ9C0D3 744 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 MFFQ9GZY8 342 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 SLC38A1Q9H2H9 487 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 CTPS2Q9NRF8 586 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 GPATCH2Q9NW75 528 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 ACAD8Q9UKU7 415 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 RCE1Q9Y256 329 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 PLEKHA6Q9Y2H5 1048 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 OR10H1Q9Y4A9 318 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 LTBP3Q9NS15 1303 aa8.07□□□□□ -1.12
LSM5-208ENST00000450169 PHYHO14832 338 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 SCAMP2O15127 329 aaKnown RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 GSTZ1O43708 216 aaPredicted RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 VEGFDO43915 354 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 RECQL4O94761 1208 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 RPA2P15927 270 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 EPORP19235 508 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 RPS12P25398 132 aaKnown RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 GRNP28799 593 aaKnown RBP8.06□□□□□ -1.12
LSM5-208ENST00000450169 CSF2RBP32927 897 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 SPAM1P38567 509 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 AKR1C2P52895 323 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 DLX5P56178 289 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 LILRA4P59901 499 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 CDK6Q00534 326 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 AKR1C1Q04828 323 aa8.06□□□□□ -1.12
LSM5-208ENST00000450169 ARHGEF7Q14155 803 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms