RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SLC6A1P30531 599 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR1E1P30953 314 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ICAM3P32942 547 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 THBS4P35443 961 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MSX2P35548 267 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PIGAP37287 484 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SRP9P49458 86 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 DGKEP52429 567 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 CTSCP53634 463 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SNRPEP62304 92 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RPA4Q13156 261 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 NAE1Q13564 534 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 FHL3Q13643 280 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 FGFBP1Q14512 234 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 GRM4Q14833 912 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PTGR1Q14914 329 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OPCMLQ14982 345 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SF3A2Q15428 464 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RBMS2Q15434 407 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 HAGHQ16775 308 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MEP1AQ16819 746 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ALG11Q2TAA5 492 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 HSDL1Q3SXM5 330 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SBK1Q52WX2 424 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 KLHL22Q53GT1 634 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PYCR3Q53H96 274 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 DCAF10Q5QP82 559 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ATXN7L2Q5T6C5 722 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 LGSNQ5TDP6 509 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ARHGAP40Q5TG30 622 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 TBC1D3GQ6DHY5 549 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR4F3Q6IEY1 312 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 HEPHL1Q6MZM0 1159 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 LRRC8EQ6NSJ5 796 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MSANTD2Q6P1R3 559 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 AFTPHQ6ULP2 937 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PLET1Q6UQ28 207 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 CD300LGQ6UXG3 332 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC36A4Q6YBV0 504 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 C3P1Q6ZMU1 363 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MEX3BQ6ZN04 569 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 TTLL10Q6ZVT0 673 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 DOK3Q7L591 496 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 LHFPL4Q7Z7J7 247 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PEG10Q86TG7 708 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF280BQ86YH2 543 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MCEMP1Q8IX19 187 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PUSL1Q8N0Z8 303 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 CFAP52Q8N1V2 620 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR137CQ8N3F9 429 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PQLC3Q8N755 202 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 C15orf54Q8N8G6 183 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 POGLUT1Q8NBL1 392 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MFSD9Q8NBP5 474 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 DNAAF1Q8NEP3 725 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 Q8NFD4 153 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR5T1Q8NG75 326 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR2L3Q8NG85 312 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR4F6Q8NGB9 312 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR9A2Q8NGT5 310 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR5R1Q8NH85 324 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR2V1Q8NHB1 315 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RXFP4Q8TDU9 374 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC35F5Q8WV83 523 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 METTL21AQ8WXB1 218 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 C22orf15Q8WYQ4 148 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 IP6K1Q92551 441 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 LARP4BQ92615 738 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RAD54LQ92698 747 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 TFGQ92734 400 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 POP5Q969H6 163 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 VOPP1Q96AW1 172 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OTULINQ96BN8 352 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MBD6Q96DN6 1003 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RTP4Q96DX8 246 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 L3HYPDHQ96EM0 354 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 EEF2KMTQ96G04 330 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SMIM8Q96KF7 97 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SENP8Q96LD8 212 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 NOL4LQ96MY1 436 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR1F2PQ96R84 312 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR20Q99678 358 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 KCNS3Q9BQ31 491 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 REEP2Q9BRK0 252 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF577Q9BSK1 485 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM208Q9BTX3 173 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 DPCDQ9BVM2 203 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 C1QTNF6Q9BXI9 259 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MRPL13Q9BYD1 178 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PARD6GQ9BYG4 376 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ARHGAP39Q9C0H5 1083 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHST5Q9GZS9 411 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 IL22Q9GZX6 179 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ING2Q9H160 280 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC25A32Q9H2D1 315 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 IKZF4Q9H2S9 585 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 KLHL31Q9H511 634 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 EPHX3Q9H6B9 360 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 NMNAT1Q9HAN9 279 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 CACYBPQ9HB71 228 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms