RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 OR4K14Q8NGD5 310 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 UBE2E3Q969T4 207 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 SLC35A4Q96G79 324 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 GPR22Q99680 433 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 MCMBPQ9BTE3 642 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 SDHAF3Q9NRP4 125 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 MED29Q9NX70 200 aa11.1□□□□□ -0.63
AC004540.1-204ENST00000449537 NPIPA5A0A0B4J1W7 369 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 CCDC189A1A4V9 331 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 NPEPPSL1A6NEC2 478 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 NPIPA7E9PJI5 369 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 CXCL13O43927 109 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 FAM58BPP0C7Q3 252 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 NPIPA8P0DM63 369 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 ARAFP10398 606 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 PTAFRP25105 342 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 ZFP36P26651 326 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 IL2RGP31785 369 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 SLC12A2P55011 1212 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 CHIT1Q13231 466 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 EXOSC7Q15024 291 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 ACAP2Q15057 778 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 ZSWIM7Q19AV6 140 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 TIMM23BQ5SRD1 257 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 OR52E8Q6IFG1 317 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 MRM1Q6IN84 353 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 SHQ1Q6PI26 577 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 FAM111BQ6SJ93 734 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 CYP20A1Q6UW02 462 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 NUFIP2Q7Z417 695 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 LCA5Q86VQ0 697 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 SVOPLQ8N434 492 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 INPP5KQ9BT40 448 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 BRINP2Q9C0B6 783 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 CNOT10Q9H9A5 744 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 ZBTB26Q9HCK0 441 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 SMYD2Q9NRG4 433 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 NPAP1Q9NZP6 1156 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 SENP1Q9P0U3 644 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 PRODH2Q9UF12 536 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 PTGDR2Q9Y5Y4 395 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 HEATR1Q9H583 2144 aaKnown RBP11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 ARFGEF3Q5TH69 2177 aa11.09□□□□□ -0.63
AC004540.1-204ENST00000449537 FAM95CA0A1B0GW59 222 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 NCF1BA6NI72 391 aaPredicted RBP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 NCF1CA8MVU1 366 aaPredicted RBP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 PLPP1O14494 284 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 TMPRSS11DO60235 418 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 TSPAN2O60636 221 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 SNRPAP09012 282 aaKnown RBP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 PABPC4LP0CB38 370 aaKnown RBP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 HKR1P10072 659 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 CPMP14384 443 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 NCF1P14598 390 aaPredicted RBP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 PORP16435 677 aaPredicted RBP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 IL12BP29460 328 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 SERPINB1P30740 379 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 APOBEC3AP31941 199 aaPredicted RBP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 KRT20P35900 424 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 SERPINB8P50452 374 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 ARFIP1P53367 373 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 MAP4K2Q12851 820 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 TBCCQ15814 346 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 MED27Q6P2C8 311 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 KLHL17Q6TDP4 642 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 B3GLCTQ6Y288 498 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 LARP4Q71RC2 724 aaKnown RBP eCLIP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 GALNT10Q86SR1 603 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 P2RY8Q86VZ1 359 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 WDR75Q8IWA0 830 aaKnown RBP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 LAS2Q8IYD9 372 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 ACMSDQ8TDX5 336 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 RNF138Q8WVD3 245 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 ESAMQ96AP7 390 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 C1GALT1C1Q96EU7 318 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 SORCS2Q96PQ0 1159 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 PKP2Q99959 881 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 CTNNAL1Q9UBT7 734 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 LGALS13Q9UHV8 139 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 USP22Q9UPT9 525 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 GPR55Q9Y2T6 319 aaPredicted RBP11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 PLLPQ9Y342 182 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 ATP23Q9Y6H3 246 aa11.08□□□□□ -0.64
AC004540.1-204ENST00000449537 A0A0A6YYD5 115 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 CXorf49A8MYA2 514 aaPredicted RBP11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 ZNF814B7Z6K7 855 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 ADAMDEC1O15204 470 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 TAPBPO15533 448 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 SCO2O43819 266 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 LILRA1O75019 489 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 EEDO75530 441 aaKnown RBP11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 STK16O75716 305 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 LYZL6O75951 148 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 SNUPNO95149 360 aaKnown RBP11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 TACSTD2P09758 323 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 MYZAPP0CAP1 466 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 STMN1P16949 149 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 CD40P25942 277 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 CRABP2P29373 138 aa11.07□□□□□ -0.64
AC004540.1-204ENST00000449537 GGT5P36269 586 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms