RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 RPS10P5Q9NQ39 176 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 PRDM9Q9NQV7 894 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 TREX1Q9NSU2 369 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 OR6C2Q9NZP2 312 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 C7orf72A4D263 438 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 BRINP1O60477 761 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 PRAMEF2O60811 474 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 ALPLP05186 524 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 CHRNB1P11230 501 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 SLC2A5P22732 501 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 CTHP32929 405 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 EIF2DP41214 584 aaKnown RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 GALEQ14376 348 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 C14orf28Q4W4Y0 310 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 NADSYN1Q6IA69 706 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 LILRB2Q8N423 598 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 ARFGAP1Q8N6T3 406 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 OR5T1Q8NG75 326 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 GTF2H4Q92759 462 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 GGHQ92820 318 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 PRRT1Q99946 306 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 DNTTIP1Q9H147 329 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 C11orf49Q9H6J7 331 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF334Q9HCZ1 680 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 DMRT3Q9NQL9 472 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 PDLIM7Q9NR12 457 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 GMEB2Q9UKD1 530 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 IER3IP1Q9Y5U9 82 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 MYH7P12883 1935 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 PPP6CO00743 305 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 AGPAT2O15120 278 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 SLC34A2O95436 690 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 HMGN2P05204 90 aaKnown RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 THEGLP0DJG4 465 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 FUT1P19526 365 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 CRABP1P29762 137 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 RAP2BP61225 183 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 MC2RQ01718 297 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 DLX2Q07687 328 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 DYRK1AQ13627 763 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 MEF2DQ14814 521 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF585AQ6P3V2 769 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 CNTN4Q8IWV2 1026 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 C12orf45Q8N5I9 185 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-204ENST00000448183 MYLIPQ8WY64 445 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 MUL1Q969V5 352 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 SHDQ96IW2 340 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 ATOH8Q96SQ7 321 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 BABAM2Q9NXR7 383 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 ABRACLQ9P1F3 81 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 V9GY05 133 aa7.34□□□□□ -1.23
NEDD9-204ENST00000448183 FAM171A2A8MVW0 826 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 FRS3O43559 492 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 KLF8O95600 359 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CNOT4O95628 575 aaKnown RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 UBBP0CG47 229 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 UBCP0CG48 685 aaKnown RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 PNMTP11086 282 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 IL4RP24394 825 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 MC3RP41968 323 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 RAB4BP61018 213 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 MLC1Q15049 377 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF674Q2M3X9 581 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ZC3H14Q6PJT7 736 aaKnown RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 TSSK4Q6SA08 328 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SERPINA12Q8IW75 414 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 GPR137CQ8N3F9 429 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 DNAJC22Q8N4W6 341 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SYNPRQ8TBG9 265 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CRYGNQ8WXF5 182 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 MR1Q95460 341 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 PEX11GQ96HA9 241 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 TCEAL7Q9BRU2 100 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SYT17Q9BSW7 474 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SLC25A18Q9H1K4 315 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CLMPQ9H6B4 373 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 NOX3Q9HBY0 568 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ARNT2Q9HBZ2 717 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 INPP5EQ9NRR6 644 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 KCNIP1Q9NZI2 227 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 MROH6A6NGR9 719 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 GABRR3A8MPY1 467 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 GAPDHSO14556 408 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 NPC1O15118 1278 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 PFKMP08237 780 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CD70P32970 193 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 CPOXP36551 454 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 FASLGP48023 281 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 SNU13P55769 128 aaKnown RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 ZNF91Q05481 1191 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 C1orf61Q13536 156 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 TDGQ13569 410 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 RAET1LQ5VY80 246 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 FCRLBQ6BAA4 426 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 METAP1DQ6UB28 335 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-204ENST00000448183 NRARPQ7Z6K4 114 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 FNDC9Q8TBE3 224 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 MALSU1Q96EH3 234 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 TGM7Q96PF1 710 aa7.33□□□□□ -1.24
NEDD9-204ENST00000448183 C1QTNF2Q9BXJ5 285 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms