RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PAICSP22234 425 aaKnown RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 DGKAP23743 735 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 MECP2P51608 486 aaKnown RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 SLC36A4Q6YBV0 504 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 SLC16A13Q7RTY0 426 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 PUSL1Q8N0Z8 303 aaKnown RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 OXR1Q8N573 874 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 MEIOBQ8N635 442 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 GOT1L1Q8NHS2 421 aaPredicted RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 SLC32A1Q9H598 525 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 CWH43Q9H720 699 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 TBC1D17Q9HA65 648 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 NTMQ9P121 344 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 KLF15Q9UIH9 416 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 COL4A6Q14031 1691 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 TRBV4-1A0A0J9YWV2 114 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 TRBC2A0A5B9 178 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 H7C4K7 107 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 SCAMP2O15127 329 aaKnown RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 GNRH1P01148 92 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 RPA2P15927 270 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 MST1P26927 711 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 MC4RP32245 332 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 SLC1A3P43003 542 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 GDF5P43026 501 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 ASMTP46597 345 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 MTNR1AP48039 350 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 PGDP52209 483 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 PCBP3P57721 371 aaKnown RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 EEF1A2Q05639 463 aaKnown RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 ELAVL2Q12926 359 aaKnown RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 EOGTQ5NDL2 527 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 C10orf91Q5T1B1 145 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 LIN54Q6MZP7 749 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 LRRN1Q6UXK5 716 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 WDR53Q7Z5U6 358 aaPredicted RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 BCDIN3DQ7Z5W3 292 aaKnown RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 BMPERQ8N8U9 685 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 L3MBTL4Q8NA19 623 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 FBXO15Q8NCQ5 510 aaPredicted RBP17.98■□□□□ 0.47
HMGA1-205ENST00000447654 OR11G2Q8NGC1 345 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 CRB3Q9BUF7 120 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 TAS2R5Q9NYW4 299 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 CAMK2AQ9UQM7 478 aa17.98■□□□□ 0.47
HMGA1-205ENST00000447654 CHURC1-FNTBB4DL54 471 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 C5orf58C9J3I9 102 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 F5H5T6 163 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CREBL2O60519 120 aaPredicted RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 SOX14O95416 240 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CRYBA1P05813 215 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CD53P19397 219 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CNR1P21554 472 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 ATP5C1P36542 298 aaKnown RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 STAT5AP42229 794 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CDKN1CP49918 316 aaPredicted RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 RNF144AP50876 292 aaPredicted RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 MVDP53602 400 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CTSCP53634 463 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 MAT1AQ00266 395 aaKnown RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 EIF2S3LQ2VIR3 472 aaKnown RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CDNFQ49AH0 187 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 TMEM255AQ5JRV8 349 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 KLHL36Q8N4N3 616 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 LINC00471Q8N535 108 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 HJURPQ8NCD3 748 aaPredicted RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 PHOSPHO2Q8TCD6 241 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 EDARADDQ8WWZ3 215 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 JAM3Q9BX67 310 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 RNF122Q9H9V4 155 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 ANGPT4Q9Y264 503 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 RUVBL1Q9Y265 456 aaKnown RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CARHSP1Q9Y2V2 147 aaKnown RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 TMEM218A2RU14 115 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 C5orf52A6NGY3 159 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 ARGFXA6NJG6 315 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 LRRC72A6NJI9 287 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 RNASET2O00584 256 aaKnown RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 ARPC5O15511 151 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 LRRTM2O43300 516 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 HYAL3O43820 417 aaPredicted RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 FKTNO75072 461 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CXCL10P02778 98 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CD3GP09693 182 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 LAMP1P11279 417 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 PAX6P26367 422 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 MPGP29372 298 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 PTGFRP43088 359 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CRATP43155 626 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 DLX5P56178 289 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 CPTPQ5TA50 214 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 LRRC70Q7Z2Q7 622 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 LRRC56Q8IYG6 542 aaPredicted RBP17.97■□□□□ 0.47
HMGA1-205ENST00000447654 PLEKHA1Q9HB21 404 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 UFSP2Q9NUQ7 469 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 ACAD8Q9UKU7 415 aa17.97■□□□□ 0.47
HMGA1-205ENST00000447654 DBX1A6NMT0 343 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 OR10H3O60404 316 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 MT-ND4P03905 459 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 SERPIND1P05546 499 aa17.96■□□□□ 0.47
HMGA1-205ENST00000447654 GP1BAP07359 652 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms