RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 HCRTR2O43614 444 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 KIAA0513O60268 411 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 CBX6O95503 412 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 IL7RP16871 459 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 DPP4P27487 766 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 PRDX6P30041 224 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SRD5A2P31213 254 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 PTGDSP41222 190 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF41P51814 821 aaPredicted RBP12.86□□□□□ -0.35
SSBP3-208ENST00000444533 TDGF1P3P51864 188 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 DSCR4P56555 118 aaPredicted RBP12.86□□□□□ -0.35
SSBP3-208ENST00000444533 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SYPL1Q16563 259 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 RUNDC3AQ59EK9 446 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 CMPK2Q5EBM0 449 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 RNFT1Q5M7Z0 435 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 PDZK1Q5T2W1 519 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 AAGABQ6PD74 315 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 DLEU7Q6UYE1 221 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 EIF3MQ7L2H7 374 aaKnown RBP12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SIAH3Q8IW03 269 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SLC30A8Q8IWU4 369 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 TMCO5AQ8N6Q1 288 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 POU5F2Q8N7G0 328 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 GATSQ8NAP1 163 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 BCAS4Q8TDM0 211 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 RNF138Q8WVD3 245 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SARAFQ96BY9 339 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 LRRC58Q96CX6 371 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SPATA5L1Q9BVQ7 753 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 CCDC106Q9BWC9 280 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SPATA9Q9BWV2 254 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 DSN1Q9H410 356 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 A4GALTQ9NPC4 353 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.86□□□□□ -0.35
SSBP3-208ENST00000444533 FBXO34Q9NWN3 711 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 TAS2R10Q9NYW0 307 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SLC25A37Q9NYZ2 338 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 FLRT3Q9NZU0 649 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SUCOQ9UBS9 1254 aaKnown RBP12.86□□□□□ -0.35
SSBP3-208ENST00000444533 ANGPT4Q9Y264 503 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 SLC35A3Q9Y2D2 325 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 L3MBTL1Q9Y468 752 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 GMEB1Q9Y692 573 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
SSBP3-208ENST00000444533 NPIPA5A0A0B4J1W7 369 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 A0A0G2JPF8 293 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 OR14I1A6ND48 311 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 HNRNPCL2B2RXH8 293 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 HNRNPCL3B7ZW38 293 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 NPIPA7E9PJI5 369 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 FBP2O00757 339 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 AIM2O14862 343 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 BCKDKO14874 412 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 FCMRO60667 390 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 HNRNPCL1O60812 293 aaKnown RBP12.85□□□□□ -0.35
SSBP3-208ENST00000444533 CYP7B1O75881 506 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 CSTAP01040 98 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 DBIP07108 87 aaKnown RBP12.85□□□□□ -0.35
SSBP3-208ENST00000444533 RFPL3SP0C7P2 107 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 NPIPA8P0DM63 369 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 HNRNPCL4P0DMR1 293 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 UBL4AP11441 157 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 GPX2P18283 190 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 PTGS2P35354 604 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 MNAT1P51948 309 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 CAPRIN1Q14444 709 aaKnown RBP12.85□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF141Q15928 474 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 ZSWIM7Q19AV6 140 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 KLHL26Q53HC5 615 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 WLSQ5T9L3 541 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 PRAMEF8Q5VWM4 474 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 PRAMEF7Q5VXH5 474 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 TYW3Q6IPR3 259 aaKnown RBP12.85□□□□□ -0.35
SSBP3-208ENST00000444533 ZAR1Q86SH2 424 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 RETREG3Q86VR2 466 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 IFNEQ86WN2 208 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 CMIPQ8IY22 773 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 ANKFN1Q8N957 763 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 WDSUB1Q8N9V3 476 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 C11orf65Q8NCR3 313 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 TOR1AIP2Q8NFQ8 470 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 OR8J3Q8NGG0 315 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 B4GALNT2Q8NHY0 566 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 BBS10Q8TAM1 723 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 PRR7Q8TB68 274 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 SLC38A5Q8WUX1 472 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 RCN3Q96D15 328 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 ZNF607Q96SK3 696 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 CPPED1Q9BRF8 314 aaPredicted RBP12.85□□□□□ -0.35
SSBP3-208ENST00000444533 SAP130Q9H0E3 1048 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 MYLK2Q9H1R3 596 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 MED11Q9P086 117 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 ACAD8Q9UKU7 415 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 IFT52Q9Y366 437 aa12.85□□□□□ -0.35
SSBP3-208ENST00000444533 MRPS18CQ9Y3D5 142 aaKnown RBP12.85□□□□□ -0.35
SSBP3-208ENST00000444533 NINQ8N4C6 2090 aa12.84□□□□□ -0.35
SSBP3-208ENST00000444533 A0A087WZY1 265 aa12.84□□□□□ -0.35
SSBP3-208ENST00000444533 TRBV5-3A0A0A0MS03 114 aa12.84□□□□□ -0.35
SSBP3-208ENST00000444533 A0A1B0GTH9 108 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms