RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ATP12AP54707 1039 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 GANABQ14697 944 aaKnown RBP15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 HEPHL1Q6MZM0 1159 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 ZNF585AQ6P3V2 769 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 SLC2A7Q6PXP3 512 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 C3P1Q6ZMU1 363 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 IFNEQ86WN2 208 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 GATSQ8NAP1 163 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 OR2M3Q8NG83 312 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 PNPT1Q8TCS8 783 aaKnown RBP15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 ZFP90Q8TF47 636 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 RAB8BQ92930 207 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 CCDC120Q96HB5 630 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 MRGBPQ9NV56 204 aa15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 MRPS18CQ9Y3D5 142 aaKnown RBP15.87■□□□□ 0.13
SMARCAL1-209ENST00000444508 A0A096LPI6 279 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 IGLV3-32A0A0A0MS00 114 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 NPIPA5A0A0B4J1W7 369 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 NPIPA7E9PJI5 369 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 HMGN4O00479 90 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 ZG16O60844 167 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 WDR1O75083 606 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 ACTL6AO96019 429 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 NPIPA8P0DM63 369 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 MAGEA8P43361 318 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 SMSP52788 366 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 CRYZQ08257 329 aaKnown RBP15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 SF3A3Q12874 501 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 GPR68Q15743 365 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 NHSL2Q5HYW2 709 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 EMC4Q5J8M3 183 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 VASNQ6EMK4 673 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 TMEM211Q6ICI0 200 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 CGB2Q6NT52 195 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 RPTNQ6XPR3 784 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 MTERF4Q7Z6M4 381 aaKnown RBP15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 ZNF614Q8N883 585 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 ABTB1Q969K4 478 aaPredicted RBP15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 ROPN1LQ96C74 230 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 SFXN2Q96NB2 322 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 UGT2B28Q9BY64 529 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 NMUR2Q9GZQ4 415 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 ZNF350Q9GZX5 532 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 TPT1P8Q9HAU6 139 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 POLE3Q9NRF9 147 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 SLC6A13Q9NSD5 602 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 ALKBH4Q9NXW9 302 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 LIPT1Q9Y234 373 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 SPTBN1Q01082 2364 aaKnown RBP15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 COL12A1Q99715 3063 aa15.86■□□□□ 0.13
SMARCAL1-209ENST00000444508 HECTD1Q9ULT8 2610 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 UTP20O75691 2785 aaKnown RBP15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 GMFGO60234 142 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 C1QCP02747 245 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 RNF224P0DH78 156 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 GABRA1P14867 456 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 BMP7P18075 431 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 HK1P19367 917 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 CAPN3P20807 821 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 TCEA1P23193 301 aaKnown RBP15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 ACVR2AP27037 513 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 MSX1P28360 303 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 CRATP43155 626 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 ZNF630Q2M218 657 aaPredicted RBP15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 GTDC1Q4AE62 458 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 GPAT3Q53EU6 434 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 KLHL26Q53HC5 615 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 AAGABQ6PD74 315 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 ENPP6Q6UWR7 440 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 PM20D2Q8IYS1 436 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 PHOSPHO1Q8TCT1 267 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 PHF10Q8WUB8 498 aaKnown RBP15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 C1GALT1C1Q96EU7 318 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 SH3YL1Q96HL8 342 aaPredicted RBP15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 TIMP4Q99727 224 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 PAIP1Q9H074 479 aaKnown RBP15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 RAD21L1Q9H4I0 556 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 ZNF385DQ9H6B1 395 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 KLHL14Q9P2G3 628 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 MKLN1Q9UL63 735 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 RPH3AQ9Y2J0 694 aaPredicted RBP15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 WDR45Q9Y484 360 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 DTNAQ9Y4J8 743 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 PCDHB14Q9Y5E9 798 aa15.85■□□□□ 0.13
SMARCAL1-209ENST00000444508 FLNBO75369 2602 aaKnown RBP15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 A0A1W2PP18 115 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 B4DXG7 233 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 FAM47E-STBD1D6RA91 191 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 NPIPB9F8W1W9 429 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 GTPBP1O00178 669 aaKnown RBP15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 ANGPT2O15123 496 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 HCRTR2O43614 444 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 FCMRO60667 390 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 GUSBP08236 651 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 HOXD4P09016 255 aaPredicted RBP15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 PTGER4P35408 488 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 SF3B4Q15427 424 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 CD226Q15762 336 aa15.84■□□□□ 0.13
SMARCAL1-209ENST00000444508 COX20Q5RI15 118 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms