RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 LINC01561Q8N1V8 128 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 SDR9C7Q8NEX9 313 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 OR7G2Q8NG99 324 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 OR9Q2Q8NGE9 314 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 OR5AP2Q8NGF4 316 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 OR5T2Q8NGG2 359 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 RPLP0P6Q8NHW5 317 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 SLC38A4Q969I6 547 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 IL17FQ96PD4 163 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 C19orf43Q9BQ61 176 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 DUSP16Q9BY84 665 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 MRPS30Q9NP92 439 aaKnown RBP4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 TEX10Q9NXF1 929 aaPredicted RBP4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 FAF1Q9UNN5 650 aaPredicted RBP4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 MAD1L1Q9Y6D9 718 aa4.48□□□□□ -1.69
TM9SF3-202ENST00000443638 SALL1Q9NSC2 1324 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 A0A1W2PR80 420 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 NPIPB9F8W1W9 429 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 G3V4G9 280 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 TNFSF12O43508 249 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 RAMP1O60894 148 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 FZD7O75084 574 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 N4BP1O75113 896 aaKnown RBP4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 CEACAM4O75871 244 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 CAVIN2O95810 425 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 SNAI1O95863 264 aaPredicted RBP4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 NUDT3O95989 172 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 RPLP0P05388 317 aaKnown RBP4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 HBQ1P09105 142 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 ACAA1P09110 424 aaPredicted RBP4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 MCF2P10911 925 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 SELEP16581 610 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 RPL4P36578 427 aaKnown RBP4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 SLC7A2P52569 658 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 SLC25A52Q3SY17 297 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 C1orf220Q5T0J3 134 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 BEND3Q5T5X7 828 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 WLSQ5T9L3 541 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 ZNF425Q6IV72 752 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 ADAMTSL5Q6ZMM2 481 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 STAC2Q6ZMT1 411 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 DHRSXQ8N5I4 330 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 CSGALNACT2Q8N6G5 542 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 KLHDC9Q8NEP7 349 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 OR1L6Q8NGR2 347 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 HCAR2Q8TDS4 363 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 TOP1MTQ969P6 601 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 TSNARE1Q96NA8 513 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 GAL3ST1Q99999 423 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 CENPKQ9BS16 269 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 ST6GALNAC5Q9BVH7 336 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 BLZF1Q9H2G9 400 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 RGCCQ9H4X1 137 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 ANKRD19PQ9H560 264 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 BICC1Q9H694 974 aaKnown RBP4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 PLEKHA3Q9HB20 300 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 NT5MQ9NPB1 228 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 AHSPQ9NZD4 102 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 PSMC3IPQ9P2W1 217 aaPredicted RBP4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 KLK11Q9UBX7 282 aa4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 NOSIPQ9Y314 301 aaKnown RBP4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 MRPS18CQ9Y3D5 142 aaKnown RBP4.47□□□□□ -1.69
TM9SF3-202ENST00000443638 RPAP1Q9BWH6 1393 aaPredicted RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 TRBV11-1A0A0K0K1C0 115 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 PRAC2D3DTV9 90 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 H3BNX3 289 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 ZNF701M0R085 212 aaPredicted RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 DLGAP1O14490 977 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 RS1O15537 224 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 PPIHO43447 177 aaKnown RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 PDE5AO76074 875 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 LRATO95237 230 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 H6PDO95479 791 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 CCNB1P14635 433 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 PAX1P15863 534 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 ACADSP16219 412 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 IMPDH1P20839 514 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 U2AF2P26368 475 aaKnown RBP eCLIP4.46□□□□□ -1.78e-8■■■■□ 20.2
TM9SF3-202ENST00000443638 NUP62P37198 522 aaPredicted RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 STARP49675 285 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 EMDP50402 254 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 CRYBA2P53672 197 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 RPS6P62753 249 aaKnown RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 ZFP36L1Q07352 338 aaKnown RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 ILF3Q12906 894 aaKnown RBP eCLIP4.46□□□□□ -1.72e-7■■■■□ 24.1
TM9SF3-202ENST00000443638 ILKQ13418 452 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 PEX6Q13608 980 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 WDR43Q15061 677 aaKnown RBP eCLIP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 ETFDHQ16134 617 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 KRT71Q3SY84 523 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 TP53I3Q53FA7 332 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 PLCXD3Q63HM9 321 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 FOXL2NBQ6ZUU3 175 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 MOB2Q70IA6 237 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 SERPINA9Q86WD7 417 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 LACC1Q8IV20 430 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 METTL27Q8N6F8 245 aaPredicted RBP4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 OR1B1Q8NGR6 318 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 CNIH3Q8TBE1 160 aa4.46□□□□□ -1.7
TM9SF3-202ENST00000443638 FAM110BQ8TC76 370 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms