RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PLBD1Q6P4A8 553 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 NUDT18Q6ZVK8 323 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 RNF180Q86T96 592 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 ACOT11Q8WXI4 607 aaPredicted RBP4.72□□□□□ -1.65
HERC1-201ENST00000443617 FUBP3Q96I24 572 aaKnown RBP eCLIP4.72□□□□□ -1.65
HERC1-201ENST00000443617 BRF2Q9HAW0 419 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 PRDM9Q9NQV7 894 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 MIOXQ9UGB7 285 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 FGF18O76093 207 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 HTR3BO95264 441 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 LIMS3P0CW19 117 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 LIMS4P0CW20 117 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 ZNF35P13682 527 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 ACVR1BP36896 505 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 RPS13P62277 151 aaKnown RBP4.72□□□□□ -1.65
HERC1-201ENST00000443617 PDZK1IP1Q13113 114 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 AIMP2Q13155 320 aaKnown RBP4.72□□□□□ -1.65
HERC1-201ENST00000443617 RAB33AQ14088 237 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 MANEAQ5SRI9 462 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 OLFML2AQ68BL7 652 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 C6orf120Q7Z4R8 191 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 OR14A16Q8NHC5 309 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 NR4A3Q92570 626 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 EXOSC8Q96B26 276 aaKnown RBP4.72□□□□□ -1.65
HERC1-201ENST00000443617 MRPS30Q9NP92 439 aaKnown RBP4.72□□□□□ -1.65
HERC1-201ENST00000443617 CNIH4Q9P003 139 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 KCMF1Q9P0J7 381 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 AK6Q9Y3D8 172 aaKnown RBP4.72□□□□□ -1.65
HERC1-201ENST00000443617 ARAP2Q8WZ64 1704 aa4.72□□□□□ -1.65
HERC1-201ENST00000443617 RHPN2P1A8MT19 583 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 HMSDA8MTL9 139 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 LY86O95711 162 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 AHRP35869 848 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 ARFIP1P53367 373 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 PNLIPRP1P54315 467 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 ARHGAP1Q07960 439 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 TMEM69Q5SWH9 247 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 RNF165Q6ZSG1 346 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 ARIH2OSQ8N7S6 290 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 OR51G2Q8NGK0 314 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 ZBED3Q96IU2 234 aaPredicted RBP4.71□□□□□ -1.65
HERC1-201ENST00000443617 ZNFX1Q9P2E3 1918 aaKnown RBP4.71□□□□□ -1.65
HERC1-201ENST00000443617 YY2O15391 372 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 SNRPEP62304 92 aaKnown RBP4.71□□□□□ -1.65
HERC1-201ENST00000443617 RELL2Q8NC24 303 aaPredicted RBP4.71□□□□□ -1.65
HERC1-201ENST00000443617 DDX31Q9H8H2 851 aaKnown RBP4.71□□□□□ -1.65
HERC1-201ENST00000443617 ZDHHC3Q9NYG2 299 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 ACRV1P26436 265 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 KLF9Q13886 244 aaPredicted RBP4.71□□□□□ -1.65
HERC1-201ENST00000443617 SLC25A35Q3KQZ1 300 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 MEPCEQ7L2J0 689 aaKnown RBP4.71□□□□□ -1.65
HERC1-201ENST00000443617 OR2W3Q7Z3T1 314 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 CMIPQ8IY22 773 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 LINC01465Q8N7H1 131 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 LGALS14Q8TCE9 139 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 SMIM4Q8WVI0 70 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 KLRG1Q96E93 195 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 C1GALT1Q9NS00 363 aa4.71□□□□□ -1.65
HERC1-201ENST00000443617 TESQ9UGI8 421 aaKnown RBP4.71□□□□□ -1.65
HERC1-201ENST00000443617 GPR39O43194 453 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CLDN7O95471 211 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 IFNA17P01571 189 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CTSHP09668 335 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ANKRD34CP0C6C1 535 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 NTSP30990 170 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 AP1S1P61966 158 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 DUSP28Q4G0W2 176 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 UBXN11Q5T124 520 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ACSM5Q6NUN0 579 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 C3orf33Q6P1S2 294 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 TSEN54Q7Z6J9 526 aaKnown RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 RNF175Q8N4F7 328 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SETD7Q8WTS6 366 aaKnown RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 GHSRQ92847 366 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 NEURL3Q96EH8 262 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 NMUR1Q9HB89 426 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 FGF20Q9NP95 211 aaPredicted RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 CXCL11O14625 94 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 IGF2P01344 180 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 PTH2RP49190 550 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ASB13Q8WXK3 278 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 HSPA12BQ96MM6 686 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CEP250Q9BV73 2442 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ZNF318Q5VUA4 2279 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 ANXA2P2A6NMY6 339 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CACNB4O00305 520 aaPredicted RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 CRYBA1P05813 215 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CERS1P27544 350 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 RAB2AP61019 212 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 SNTB1Q13884 538 aaKnown RBP4.71□□□□□ -1.66
HERC1-201ENST00000443617 OR6K2Q8NGY2 324 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 OR52I2Q8NH67 350 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 P2RY12Q9H244 342 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 OR51M1Q9H341 326 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 HRASLSQ9HDD0 168 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 NRIP3Q9NQ35 241 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CHST2Q9Y4C5 530 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 EIF3GO75821 320 aaKnown RBP eCLIP4.71□□□□□ -1.66
HERC1-201ENST00000443617 FGF2P09038 288 aa4.71□□□□□ -1.66
HERC1-201ENST00000443617 CALCRP30988 508 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms