RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 NFIBO00712 420 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 FZD7O75084 574 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 SH3BGRLO75368 114 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ZNF44P15621 663 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 NCK1P16333 377 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 LBX1P52954 281 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 PROX2Q3B8N5 592 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 PIGGQ5H8A4 983 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 PRSS55Q6UWB4 352 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 Q6ZNB5 142 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 RHOT1Q8IXI2 618 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ZNF480Q8WV37 535 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 SLC45A3Q96JT2 553 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 GPR20Q99678 358 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 MND1Q9BWT6 205 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 LRRC4CQ9HCJ2 640 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 GPR27Q9NS67 375 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ACSL6Q9UKU0 697 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 RLFQ13129 1914 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 MROH7Q68CQ1 1323 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 C13orf42A0A1B0GVH6 325 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 RNASEK-C17orf49H0YIS7 233 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 H3BMM5 538 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ABHD16AO95870 558 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 IFNA10P01566 189 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 C4BPAP04003 597 aaKnown RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ZNF806P0C7X5 589 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 KCNE1P15382 129 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 GZMHP20718 246 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 TIA1P31483 386 aaKnown RBP eCLIP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 WASP42768 502 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ART1P52961 327 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 FKBP3Q00688 224 aaKnown RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 MFSD9Q8NBP5 474 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 BHLHE22Q8NFJ8 381 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ACTRT3Q9BYD9 372 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ATG10Q9H0Y0 220 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ZNF639Q9UID6 485 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 DDTLA6NHG4 134 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 SHBGP04278 402 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 RPLP2P05387 115 aaKnown RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 MBL2P11226 248 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 CETPP11597 493 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 TIMP3P35625 211 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 IDH2P48735 452 aaKnown RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 VEGFCP49767 419 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 ADORA2A-AS1P86434 159 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 PDIA2Q13087 525 aaKnown RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 SMN1Q16637 294 aaKnown RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 EXOC3L2Q2M3D2 409 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 CTSL3PQ5NE16 218 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 CDC42EP5Q6NZY7 148 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 LRFN4Q6PJG9 635 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 SCIMPQ6UWF3 145 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 PQLC1Q8N2U9 271 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 OR10W1Q8NGF6 305 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 NUDCD2Q8WVJ2 157 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 FAM151AQ8WW52 585 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 BIRC7Q96CA5 298 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 UCK2Q9BZX2 261 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 KIR3DX1Q9H7L2 352 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 RAD18Q9NS91 495 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 HCN3Q9P1Z3 774 aa9.81□□□□□ -0.84
SYNE2-206ENST00000441438 SAE1Q9UBE0 346 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.81□□□□□ -0.84
SYNE2-206ENST00000441438 NPEPPSL1A6NEC2 478 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 CDC7O00311 574 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 LY86O95711 162 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 TTLL1O95922 423 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 MUC1P15941 1255 aaPredicted RBP9.8□□□□□ -0.84
SYNE2-206ENST00000441438 KDELR2P33947 212 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 ACVR1BP36896 505 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 HNF4GQ14541 408 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 ADPRMQ3LIE5 342 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 MRPL14Q6P1L8 145 aaKnown RBP9.8□□□□□ -0.84
SYNE2-206ENST00000441438 GCNT7Q6ZNI0 430 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 GPRIN1Q7Z2K8 1008 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 IRF2BP2Q7Z5L9 587 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 CACUL1Q86Y37 369 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 WDSUB1Q8N9V3 476 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 OR8J3Q8NGG0 315 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 LPAR1Q92633 364 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 SENP5Q96HI0 755 aaPredicted RBP9.8□□□□□ -0.84
SYNE2-206ENST00000441438 FICDQ9BVA6 458 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 HRASLSQ9HDD0 168 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 TMEM161AQ9NX61 479 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 CDH22Q9UJ99 828 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 PADI3Q9ULW8 664 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 CEP350Q5VT06 3117 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 TRAV26-1A0A087WT03 109 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 KCNE1BA0A087WTH5 132 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 H3BNX3 289 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 ENTPD5O75356 428 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 WNT11O96014 354 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 CST1P01037 141 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 TEKQ02763 1124 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 QRICH1Q2TAL8 776 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 VPS26BQ4G0F5 336 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 LRRC73Q5JTD7 316 aa9.8□□□□□ -0.84
SYNE2-206ENST00000441438 SPOUT1Q5T280 376 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms