RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 RIBC2Q9H4K1 309 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 KLHL28Q9NXS3 571 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CLDN16Q9Y5I7 305 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 LYVE1Q9Y5Y7 322 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DOCK10Q96BY6 2186 aa13.46□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TNRC6AQ8NDV7 1962 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 KALRNO60229 2985 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 NINQ8N4C6 2090 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 NSG1A0A0A6YYJ2 146 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 A8MUA0 341 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 UGT2B11O75310 529 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SMNDC1O75940 238 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CCNB2O95067 398 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 HPP00738 406 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 GNAO1P09471 354 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PABPC4LP0CB38 370 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ACP2P11117 423 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 HSD17B7P56937 341 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SERTAD2Q14140 314 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNHIT3Q15649 155 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 EXOC3L2Q2M3D2 409 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 TRMT12Q53H54 448 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 HEPHL1Q6MZM0 1159 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ISLR2Q6UXK2 745 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 MED25Q71SY5 747 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CPEB2Q7Z5Q1 589 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 WDR53Q7Z5U6 358 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 GALNT5Q7Z7M9 940 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 COX18Q8N8Q8 333 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SETD9Q8NE22 299 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SLC35A4Q96G79 324 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 FER1L6-AS2Q96M78 137 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 STACQ99469 402 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 BARD1Q99728 777 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF700Q9H0M5 742 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PIGUQ9H490 435 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF556Q9HAH1 456 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 FAM118AQ9NWS6 357 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 TMCC3Q9ULS5 477 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 WDR45Q9Y484 360 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 MMACHCQ9Y4U1 282 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PCDHGB5Q9Y5G0 923 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 KCNE3Q9Y6H6 103 aa13.45□□□□□ -0.26
TNFRSF1A-204ENST00000440083 A0A1W2PQ72 361 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 TCRBV16S1A1N1A0A5B0 115 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 A8MVJ9 347 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 H3BNH8 94 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 J3KTA2 159 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SYT5O00445 386 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 BCKDKO14874 412 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ATXN7O15265 892 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 UGT2B17O75795 530 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SOX30O94993 753 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CLIC3O95833 236 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PDGFAP04085 211 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ANXA8P13928 327 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 STT3AP46977 705 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DAPP51397 102 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 RPS6KA3P51812 740 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 RRADP55042 308 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 IGLV3-21P80748 117 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 CHRNEQ04844 493 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 MAP4K2Q12851 820 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 BIKQ13323 160 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 IL18R1Q13478 541 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 GANABQ14697 944 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 EXOSC7Q15024 291 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DUSP5Q16690 384 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ARHGAP11BQ3KRB8 267 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 KCTD21Q4G0X4 260 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 EIPR1Q53HC9 387 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF311Q5JNZ3 666 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 FGD3Q5JSP0 725 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ANKRD34AQ69YU3 496 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 KDM4DQ6B0I6 523 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 FAHD1Q6P587 224 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 USP51Q70EK9 711 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 NDUFAF7Q7L592 441 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 OLIG3Q7RTU3 272 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 TSEN54Q7Z6J9 526 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PEX5LQ8IYB4 626 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SLC16A11Q8NCK7 471 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 PIK3C3Q8NEB9 887 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 FDCSPQ8NFU4 85 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 OR52R1Q8NGF1 315 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 OR4C15Q8NGM1 316 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 OR52J3Q8NH60 311 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DOK4Q8TEW6 326 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 NR4A3Q92570 626 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 RIT1Q92963 219 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 NACC2Q96BF6 587 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ABHD17AQ96GS6 310 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 RBM18Q96H35 190 aaKnown RBP13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 NUDT9Q9BW91 350 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ALOXE3Q9BYJ1 711 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 SLC38A1Q9H2H9 487 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 ZNF71Q9NQZ8 489 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 DUSP22Q9NRW4 184 aa13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 C19orf25Q9UFG5 118 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF1A-204ENST00000440083 TMEFF2Q9UIK5 374 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms