RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 TIMM50Q3ZCQ8 353 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 NHLRC3Q5JS37 347 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 C1QTNF12Q5T7M4 302 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 PAQR7Q86WK9 346 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 CACUL1Q86Y37 369 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 LRRC49Q8IUZ0 686 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 TTC30BQ8N4P2 665 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 TEKT4Q8WW24 435 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 RSPH1Q8WYR4 309 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 ZNF285Q96NJ3 590 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 SDHCQ99643 169 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 IL12RB2Q99665 862 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 CCL19Q99731 98 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 UCK2Q9BZX2 261 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 RNF121Q9H920 327 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 DNAJC4Q9NNZ3 241 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 NKIRAS2Q9NYR9 191 aa1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 AKAP7Q9P0M2 348 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 APOBP04114 4563 aaKnown RBP1.96□□□□□ -2.1
HMGB1P18-201ENST00000438801 CCT8L1PA6NM43 557 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 GGPS1O95749 300 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 SEMA4FO95754 770 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 LY6G6CO95867 125 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 SERPING1P05155 500 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 ATP5BP06576 529 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 ABCB1P08183 1280 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 PLEKP08567 350 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 HSPA5P11021 654 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 UMPSP11172 480 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 CD1DP15813 335 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 FCGR2BP31994 310 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 FCGR2CP31995 323 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 PCGF2P35227 344 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 SRP14P37108 136 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 OPRD1P41143 372 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 SLC1A4P43007 532 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 RAD52P43351 418 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 LIG4P49917 911 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 MECOMQ03112 1051 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 KDSRQ06136 332 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 TFF3Q07654 80 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 ILF2Q12905 390 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 PTPRCAPQ14761 206 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 SNRNP35Q16560 246 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 KNOP1Q1ED39 458 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 CLEC12BQ2HXU8 276 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 CCDC184Q52MB2 194 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 SPANXN4Q5MJ08 99 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 MFSD4BQ5TF39 518 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 ATF7IP2Q5U623 682 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 NAA16Q6N069 864 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 FUT10Q6P4F1 479 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 ZBTB49Q6ZSB9 765 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 TMEM179Q6ZVK1 233 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 DET1Q7L5Y6 550 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 FAM228AQ86W67 206 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 GPR65Q8IYL9 337 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 OR8H2Q8N162 312 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 RPP25LQ8N5L8 163 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 CCDC185Q8N715 623 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 BCORP1Q8N888 145 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 SYT2Q8N9I0 419 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 ESAMQ96AP7 390 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 OTUB1Q96FW1 271 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 PGM2Q96G03 612 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 MUS81Q96NY9 551 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 PAPOLGQ9BWT3 736 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 RIMS4Q9H426 269 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 CNOT10Q9H9A5 744 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 EML4Q9HC35 981 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 PIH1D3Q9NQM4 214 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 ADAM22Q9P0K1 906 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 RPS6KA6Q9UK32 745 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 ISY1Q9ULR0 285 aaKnown RBP1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 MEMO1Q9Y316 297 aa1.95□□□□□ -2.1
HMGB1P18-201ENST00000438801 DNAH3Q8TD57 4116 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 ARHGEF37A1IGU5 675 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 MBLAC1A4D2B0 266 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 C17orf105B2RV13 164 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 K7EIL1 84 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 TLR4O00206 839 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 SLC19A2O60779 497 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 BEST1O76090 585 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 KBTBD11O94819 623 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 TOXO94900 526 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 PTMAP06454 111 aaKnown RBP1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 YES1P07947 543 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 CCL4P13236 92 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 EEF1B2P24534 225 aaKnown RBP1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 EEF1DP29692 281 aaKnown RBP1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 DLSTP36957 453 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 GSTO1P78417 241 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 BFSP1Q12934 665 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 PRPF4BQ13523 1007 aaKnown RBP1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 TOMM20Q15388 145 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 KYNUQ16719 465 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 POM121L1PQ3SYA9 428 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 TCP11X2Q5H9J9 407 aa1.94□□□□□ -2.1
HMGB1P18-201ENST00000438801 KRT80Q6KB66 452 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms