RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 MGAT4BQ9UQ53 548 aa10.78□□□□□ -0.68
SMAD9-IT1-201ENST00000437983 CFL2Q9Y281 166 aa10.78□□□□□ -0.68
SMAD9-IT1-201ENST00000437983 ATP23Q9Y6H3 246 aa10.78□□□□□ -0.68
SMAD9-IT1-201ENST00000437983 A0A1W2PR80 420 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 MIF4GDA9UHW6 222 aaKnown RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 LCE2BO14633 110 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 STAMBPO95630 424 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CT45A8P0DMV1 189 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CT45A9P0DMV2 189 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 PORP16435 677 aaPredicted RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 HSD3B2P26439 372 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 EVI2BP34910 448 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 GGT5P36269 586 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 FEN1P39748 380 aaKnown RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 SARNPP82979 210 aaKnown RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 EFR3AQ14156 821 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 TGFBIQ15582 683 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 LTB4RQ15722 352 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CT45A2Q5DJT8 189 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 TIMM23BQ5SRD1 257 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 FAM180BQ6P0A1 224 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 MED27Q6P2C8 311 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CYP20A1Q6UW02 462 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 NPSR1Q6W5P4 371 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 C1orf229Q6ZS94 237 aaPredicted RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CNGA4Q8IV77 575 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 ZNF540Q8NDQ6 660 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 OR2V1Q8NHB1 315 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 HUS1BQ8NHY5 278 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 DUSP19Q8WTR2 217 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 HES6Q96HZ4 224 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 SIGLEC10Q96LC7 697 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 MTERF1Q99551 399 aaKnown RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 VRK1Q99986 396 aaPredicted RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 C1QTNF6Q9BXI9 259 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 C1QTNF5Q9BXJ0 243 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 TMEM185BQ9H7F4 350 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 DDX31Q9H8H2 851 aaKnown RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 MED29Q9NX70 200 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CTNNAL1Q9UBT7 734 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 ING1Q9UK53 422 aaPredicted RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 USP22Q9UPT9 525 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 REXO2Q9Y3B8 237 aaKnown RBP10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 SPEF1Q9Y4P9 236 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 PTGDR2Q9Y5Y4 395 aa10.77□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 ADAMDEC1O15204 470 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 FADS1O60427 444 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 STK16O75716 305 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CTAGE8P0CG41 777 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 IGHV1-2P23083 117 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 PTAFRP25105 342 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 IL12BP29460 328 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 APOBEC3AP31941 199 aaPredicted RBP10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 MAGEA6P43360 314 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 UBA52P62987 128 aaKnown RBP10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 MRPS35P82673 323 aaKnown RBP10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CHRNEQ04844 493 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 E2F2Q14209 437 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 ACAP2Q15057 778 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 TBCCQ15814 346 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 GLYR1Q49A26 553 aaPredicted RBP10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 SHQ1Q6PI26 577 aaKnown RBP10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 Q6ZT83 130 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 TDRPQ86YL5 185 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 C1QL4Q86Z23 238 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CTAGE4Q8IX94 777 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 SPATA6LQ8N4H0 392 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 GOLGA6L1Q8N7Z2 621 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 OR52N5Q8NH56 324 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 UHMK1Q8TAS1 419 aaKnown RBP10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 RNF128Q8TEB7 428 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 TAF15Q92804 592 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 OSTF1Q92882 214 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 JMJD8Q96S16 334 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 SLC6A7Q99884 636 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 LRRC1Q9BTT6 524 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CDC42EP4Q9H3Q1 356 aaKnown RBP10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 PTGES2Q9H7Z7 377 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 LPAR2Q9HBW0 351 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 KLHL13Q9P2N7 655 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 VDAC3Q9Y277 283 aa10.76□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 OR5H1A6NKK0 313 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 M0R1B8 84 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CCNT2O60583 730 aaKnown RBP10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 PGM3O95394 542 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 MLNP12872 115 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 GGT1P19440 569 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 PCMT1P22061 227 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 PNLIPRP2P54317 469 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 GPX6P59796 221 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CRYMQ14894 314 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 CCNG2Q16589 344 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 SEL1L2Q5TEA6 688 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 HBMQ6B0K9 141 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 GTF2IRD2BQ6EKJ0 949 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 FAM45BPQ6NSW5 357 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 MARCH3Q86UD3 253 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 GTF2IRD2Q86UP8 949 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 GLCCI1Q86VQ1 547 aa10.75□□□□□ -0.69
SMAD9-IT1-201ENST00000437983 WDR75Q8IWA0 830 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms