RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ASPGQ86U10 573 aa8.82□□□□□ -1
CUX1-206ENST00000437600 PHC2Q8IXK0 858 aa8.82□□□□□ -1
CUX1-206ENST00000437600 GIMAP5Q96F15 307 aa8.82□□□□□ -1
CUX1-206ENST00000437600 OR2A5Q96R48 311 aa8.82□□□□□ -1
CUX1-206ENST00000437600 PSD2Q9BQI7 771 aa8.82□□□□□ -1
CUX1-206ENST00000437600 FUZQ9BT04 418 aa8.82□□□□□ -1
CUX1-206ENST00000437600 IL21RQ9HBE5 538 aa8.82□□□□□ -1
CUX1-206ENST00000437600 C20orf141Q9NUB4 165 aa8.82□□□□□ -1
CUX1-206ENST00000437600 IGHV1OR15-9A0A0B4J2B8 117 aa8.82□□□□□ -1
CUX1-206ENST00000437600 SPTY2D1-AS1A0A0U1RR47 76 aa8.82□□□□□ -1
CUX1-206ENST00000437600 A0A1B0GVC2 190 aa8.82□□□□□ -1
CUX1-206ENST00000437600 C2orf92A0A1B0GVN3 265 aa8.82□□□□□ -1
CUX1-206ENST00000437600 A6NIN4 97 aa8.82□□□□□ -1
CUX1-206ENST00000437600 TFECO14948 347 aaPredicted RBP8.82□□□□□ -1
CUX1-206ENST00000437600 FGF17O60258 216 aa8.82□□□□□ -1
CUX1-206ENST00000437600 CT62P0C5K7 136 aa8.82□□□□□ -1
CUX1-206ENST00000437600 UBL4AP11441 157 aa8.82□□□□□ -1
CUX1-206ENST00000437600 NT5EP21589 574 aa8.82□□□□□ -1
CUX1-206ENST00000437600 CSTF2P33240 577 aaKnown RBP eCLIP8.82□□□□□ -12e-6■■■□□ 18.4
CUX1-206ENST00000437600 SDC2P34741 201 aa8.82□□□□□ -1
CUX1-206ENST00000437600 VSX2P58304 361 aaPredicted RBP8.82□□□□□ -1
CUX1-206ENST00000437600 RPL6Q02878 288 aaKnown RBP8.82□□□□□ -1
CUX1-206ENST00000437600 HHEXQ03014 270 aa8.82□□□□□ -1
CUX1-206ENST00000437600 NDUFA5Q16718 116 aa8.82□□□□□ -1
CUX1-206ENST00000437600 ZNF791Q3KP31 576 aaPredicted RBP8.82□□□□□ -1
CUX1-206ENST00000437600 TMEM35AQ53FP2 167 aa8.82□□□□□ -1
CUX1-206ENST00000437600 C12orf73Q69YU5 71 aa8.82□□□□□ -1
CUX1-206ENST00000437600 FIGLAQ6QHK4 219 aa8.82□□□□□ -1
CUX1-206ENST00000437600 PAQR7Q86WK9 346 aa8.82□□□□□ -1
CUX1-206ENST00000437600 OR4N2Q8NGD1 307 aa8.82□□□□□ -1
CUX1-206ENST00000437600 BBS10Q8TAM1 723 aa8.82□□□□□ -1
CUX1-206ENST00000437600 RNFT2Q96EX2 444 aa8.82□□□□□ -1
CUX1-206ENST00000437600 KLHDC7BQ96G42 594 aa8.82□□□□□ -1
CUX1-206ENST00000437600 C10orf90Q96M02 699 aa8.82□□□□□ -1
CUX1-206ENST00000437600 NEDD4LQ96PU5 975 aa8.82□□□□□ -1
CUX1-206ENST00000437600 DPH1Q9BZG8 443 aa8.82□□□□□ -1
CUX1-206ENST00000437600 C3orf14Q9HBI5 128 aa8.82□□□□□ -1
CUX1-206ENST00000437600 FAM60AQ9NP50 221 aa8.82□□□□□ -1
CUX1-206ENST00000437600 KCMF1Q9P0J7 381 aa8.82□□□□□ -1
CUX1-206ENST00000437600 KCNE5Q9UJ90 142 aa8.82□□□□□ -1
CUX1-206ENST00000437600 ADAM29Q9UKF5 820 aa8.82□□□□□ -1
CUX1-206ENST00000437600 ACAD8Q9UKU7 415 aa8.82□□□□□ -1
CUX1-206ENST00000437600 SNX7Q9UNH6 387 aa8.82□□□□□ -1
CUX1-206ENST00000437600 RPL36Q9Y3U8 105 aaKnown RBP8.82□□□□□ -1
CUX1-206ENST00000437600 WDR45Q9Y484 360 aa8.82□□□□□ -1
CUX1-206ENST00000437600 HEBP2Q9Y5Z4 205 aa8.82□□□□□ -1
CUX1-206ENST00000437600 CLCA3PQ9Y6N3 262 aa8.82□□□□□ -1
CUX1-206ENST00000437600 A8MV72 311 aaPredicted RBP8.81□□□□□ -1
CUX1-206ENST00000437600 H0YGG7 62 aa8.81□□□□□ -1
CUX1-206ENST00000437600 HRKO00198 91 aa8.81□□□□□ -1
CUX1-206ENST00000437600 MAGEB4O15481 346 aaPredicted RBP8.81□□□□□ -1
CUX1-206ENST00000437600 WNT1P04628 370 aa8.81□□□□□ -1
CUX1-206ENST00000437600 ALOX5P09917 674 aa8.81□□□□□ -1
CUX1-206ENST00000437600 SLC35G6P0C7Q6 338 aa8.81□□□□□ -1
CUX1-206ENST00000437600 MYF5P13349 255 aa8.81□□□□□ -1
CUX1-206ENST00000437600 CPMP14384 443 aa8.81□□□□□ -1
CUX1-206ENST00000437600 RABIFP47224 123 aa8.81□□□□□ -1
CUX1-206ENST00000437600 ARF3P61204 181 aaPredicted RBP8.81□□□□□ -1
CUX1-206ENST00000437600 RPS25P62851 125 aaKnown RBP8.81□□□□□ -1
CUX1-206ENST00000437600 SHC2P98077 582 aa8.81□□□□□ -1
CUX1-206ENST00000437600 ZXDAP98168 799 aa8.81□□□□□ -1
CUX1-206ENST00000437600 FCRL6Q6DN72 434 aa8.81□□□□□ -1
CUX1-206ENST00000437600 C1orf94Q6P1W5 598 aa8.81□□□□□ -1
CUX1-206ENST00000437600 PLEKHM3Q6ZWE6 761 aa8.81□□□□□ -1
CUX1-206ENST00000437600 GDPD3Q7L5L3 318 aa8.81□□□□□ -1
CUX1-206ENST00000437600 PARGQ86W56 976 aa8.81□□□□□ -1
CUX1-206ENST00000437600 SLC30A8Q8IWU4 369 aa8.81□□□□□ -1
CUX1-206ENST00000437600 NANOGP1Q8N7R0 232 aa8.81□□□□□ -1
CUX1-206ENST00000437600 MFSD9Q8NBP5 474 aa8.81□□□□□ -1
CUX1-206ENST00000437600 TTLQ8NG68 377 aa8.81□□□□□ -1
CUX1-206ENST00000437600 OR51A7Q8NH64 312 aa8.81□□□□□ -1
CUX1-206ENST00000437600 PFN4Q8NHR9 129 aa8.81□□□□□ -1
CUX1-206ENST00000437600 FLVCR1-AS1Q8TAF5 88 aa8.81□□□□□ -1
CUX1-206ENST00000437600 CRELD1Q96HD1 420 aa8.81□□□□□ -1
CUX1-206ENST00000437600 SAMD8Q96LT4 415 aa8.81□□□□□ -1
CUX1-206ENST00000437600 SDHCQ99643 169 aaPredicted RBP8.81□□□□□ -1
CUX1-206ENST00000437600 TMED9Q9BVK6 235 aa8.81□□□□□ -1
CUX1-206ENST00000437600 CHRDQ9H2X0 955 aa8.81□□□□□ -1
CUX1-206ENST00000437600 NT5DC2Q9H857 520 aa8.81□□□□□ -1
CUX1-206ENST00000437600 PCDHGB6Q9Y5F9 930 aa8.81□□□□□ -1
CUX1-206ENST00000437600 RIF1Q5UIP0 2472 aaKnown RBP8.81□□□□□ -1
CUX1-206ENST00000437600 ADAMTS9Q9P2N4 1935 aa8.81□□□□□ -1
CUX1-206ENST00000437600 A0A1W2PPC4 97 aa8.81□□□□□ -1
CUX1-206ENST00000437600 SH3D21A4FU49 640 aa8.81□□□□□ -1
CUX1-206ENST00000437600 SOCS6O14544 535 aa8.81□□□□□ -1
CUX1-206ENST00000437600 HRO43593 1189 aa8.81□□□□□ -1
CUX1-206ENST00000437600 GMFGO60234 142 aa8.81□□□□□ -1
CUX1-206ENST00000437600 SCG5P05408 212 aa8.81□□□□□ -1
CUX1-206ENST00000437600 GYPBP06028 91 aa8.81□□□□□ -1
CUX1-206ENST00000437600 CELP19835 753 aa8.81□□□□□ -1
CUX1-206ENST00000437600 BAK1Q16611 211 aa8.81□□□□□ -1
CUX1-206ENST00000437600 CRTC2Q53ET0 693 aaPredicted RBP8.81□□□□□ -1
CUX1-206ENST00000437600 SPANXN2Q5MJ10 180 aa8.81□□□□□ -1
CUX1-206ENST00000437600 ATAD3BQ5T9A4 648 aa8.81□□□□□ -1
CUX1-206ENST00000437600 SLC27A4Q6P1M0 643 aa8.81□□□□□ -1
CUX1-206ENST00000437600 WDR88Q6ZMY6 472 aa8.81□□□□□ -1
CUX1-206ENST00000437600 LILRB2Q8N423 598 aa8.81□□□□□ -1
CUX1-206ENST00000437600 OR4K14Q8NGD5 310 aa8.81□□□□□ -1
CUX1-206ENST00000437600 OR4Q3Q8NH05 313 aa8.81□□□□□ -1
CUX1-206ENST00000437600 LILRB1Q8NHL6 650 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms